<div dir="ltr">Last time I installed data.table from source on Windows (7) I didn't have any issue.<div>Do you have the commands you would like me to try?</div><div>Or just install from source the latest master from Github?<br><br><div class="gmail_quote"><div dir="ltr">On Thu, Aug 6, 2015 at 7:00 AM <<a href="mailto:datatable-help-request@lists.r-forge.r-project.org">datatable-help-request@lists.r-forge.r-project.org</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Send datatable-help mailing list submissions to<br>
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Today's Topics:<br>
<br>
1. bug is fread ? (statquant3)<br>
2. Re: bug is fread ? (Arunkumar Srinivasan)<br>
3. Re: Any date for 1.9.6 push to CRAN? (Gene Leynes)<br>
4. Re: Any date for 1.9.6 push to CRAN? (Matt Dowle)<br>
<br>
<br>
----------------------------------------------------------------------<br>
<br>
Message: 1<br>
Date: Wed, 5 Aug 2015 04:47:47 -0700 (PDT)<br>
From: statquant3 <<a href="mailto:statquant@outlook.com" target="_blank">statquant@outlook.com</a>><br>
To: <a href="mailto:datatable-help@lists.r-forge.r-project.org" target="_blank">datatable-help@lists.r-forge.r-project.org</a><br>
Subject: [datatable-help] bug is fread ?<br>
Message-ID: <<a href="mailto:1438775267348-4710776.post@n4.nabble.com" target="_blank">1438775267348-4710776.post@n4.nabble.com</a>><br>
Content-Type: text/plain; charset=us-ascii<br>
<br>
Trying to read the following csv:<br>
<br>
date,time,name,propertyValue,programName<br>
20150804,07:17:22.928,aerhqer,strjhwr,adtrhadtr<br>
20150804,07:17:22.928,A__z,"*SHLVL="*TMOUT,datrhnaetrh<br>
20150804,07:17:22.928,adrhae,true,adthad<br>
<br>
R) fread('test.csv')<br>
Error in fread("/u/delta1/colinu/test/freadTest/PropertiesLog.csv") :<br>
Field 4 on line 3 starts with quote (") but then has a problem. It can<br>
contain balanced unescaped quoted subregions but if it does it can't contain<br>
embedded \n as well. Check for unbalanced unescaped quotes:<br>
"*SHLVL="*TMOUT,datrhnaetrh<br>
<br>
read.csv2 works...<br>
<br>
R)<br>
setDT(read.csv2(file='/u/delta1/colinu/test/freadTest/PropertiesLog.csv',sep=','))[]<br>
date time name propertyValue programName<br>
1: 20150804 07:17:22.928 aerhqer strjhwr adtrhadtr<br>
2: 20150804 07:17:22.928 A__z *SHLVL=*TMOUT datrhnaetrh<br>
3: 20150804 07:17:22.928 adrhae true adthad<br>
<br>
Can you guys reproduce, can that be considered a bug ?<br>
If not how can I trick fread in reproducing read.csv2 ?<br>
<br>
<br>
<br>
<br>
--<br>
View this message in context: <a href="http://r.789695.n4.nabble.com/bug-is-fread-tp4710776.html" rel="noreferrer" target="_blank">http://r.789695.n4.nabble.com/bug-is-fread-tp4710776.html</a><br>
Sent from the datatable-help mailing list archive at Nabble.com.<br>
<br>
<br>
------------------------------<br>
<br>
Message: 2<br>
Date: Wed, 5 Aug 2015 13:52:00 +0200<br>
From: Arunkumar Srinivasan <<a href="mailto:aragorn168b@gmail.com" target="_blank">aragorn168b@gmail.com</a>><br>
To: statquant3 <<a href="mailto:statquant@outlook.com" target="_blank">statquant@outlook.com</a>>,<br>
<a href="mailto:datatable-help@lists.r-forge.r-project.org" target="_blank">datatable-help@lists.r-forge.r-project.org</a><br>
Subject: Re: [datatable-help] bug is fread ?<br>
Message-ID: <etPan.55c1f8fe.4c051f3b.16f@Arunkumars-MBP><br>
Content-Type: text/plain; charset="utf-8"<br>
<br>
Yes. (Known) bug. Will fix.<br>
<br>
--?<br>
Arun<br>
<br>
On 5 Aug 2015 at 13:50:31, statquant3 (<a href="mailto:statquant@outlook.com" target="_blank">statquant@outlook.com</a>) wrote:<br>
<br>
Trying to read the following csv:<br>
<br>
date,time,name,propertyValue,programName<br>
20150804,07:17:22.928,aerhqer,strjhwr,adtrhadtr<br>
20150804,07:17:22.928,A__z,"*SHLVL="*TMOUT,datrhnaetrh<br>
20150804,07:17:22.928,adrhae,true,adthad<br>
<br>
R) fread('test.csv')<br>
Error in fread("/u/delta1/colinu/test/freadTest/PropertiesLog.csv") :<br>
Field 4 on line 3 starts with quote (") but then has a problem. It can<br>
contain balanced unescaped quoted subregions but if it does it can't contain<br>
embedded \n as well. Check for unbalanced unescaped quotes:<br>
"*SHLVL="*TMOUT,datrhnaetrh<br>
<br>
read.csv2 works...<br>
<br>
R)<br>
setDT(read.csv2(file='/u/delta1/colinu/test/freadTest/PropertiesLog.csv',sep=','))[]<br>
date time name propertyValue programName<br>
1: 20150804 07:17:22.928 aerhqer strjhwr adtrhadtr<br>
2: 20150804 07:17:22.928 A__z *SHLVL=*TMOUT datrhnaetrh<br>
3: 20150804 07:17:22.928 adrhae true adthad<br>
<br>
Can you guys reproduce, can that be considered a bug ?<br>
If not how can I trick fread in reproducing read.csv2 ?<br>
<br>
<br>
<br>
<br>
--<br>
View this message in context: <a href="http://r.789695.n4.nabble.com/bug-is-fread-tp4710776.html" rel="noreferrer" target="_blank">http://r.789695.n4.nabble.com/bug-is-fread-tp4710776.html</a><br>
Sent from the datatable-help mailing list archive at Nabble.com.<br>
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------------------------------<br>
<br>
Message: 3<br>
Date: Wed, 5 Aug 2015 13:24:16 -0500<br>
From: Gene Leynes <<a href="mailto:gleynes%2Br@gmail.com" target="_blank">gleynes+r@gmail.com</a>><br>
To: Matt Dowle <<a href="mailto:mattjdowle@gmail.com" target="_blank">mattjdowle@gmail.com</a>><br>
Cc: Damian Betebenner <<a href="mailto:DBetebenner@nciea.org" target="_blank">DBetebenner@nciea.org</a>>,<br>
"<a href="mailto:datatable-help@lists.r-forge.r-project.org" target="_blank">datatable-help@lists.r-forge.r-project.org</a>"<br>
<<a href="mailto:datatable-help@lists.r-forge.r-project.org" target="_blank">datatable-help@lists.r-forge.r-project.org</a>><br>
Subject: Re: [datatable-help] Any date for 1.9.6 push to CRAN?<br>
Message-ID:<br>
<<a href="mailto:CAOBARViLW7MSXQFN9KwM0pbzA%2BkJSUVi_QJ4Wa1AxR8M21%2Bu7A@mail.gmail.com" target="_blank">CAOBARViLW7MSXQFN9KwM0pbzA+kJSUVi_QJ4Wa1AxR8M21+u7A@mail.gmail.com</a>><br>
Content-Type: text/plain; charset="utf-8"<br>
<br>
I was also hoping to find out the next push date. There have been some<br>
significant bug fixes since last October!<br>
<br>
Any way that someone (maybe even me) can help on the outstanding issues?<br>
<br>
I went to the valgrind site hoping to find the issues, but I guess there's<br>
no way to see the tests unless you're the admin?<br>
<br>
<br>
Thanks,<br>
<br>
Gene<br>
<br>
PS: valgrind should link to data.table too!<br>
<a href="http://valgrind.org/gallery/users.html#scientific" rel="noreferrer" target="_blank">http://valgrind.org/gallery/users.html#scientific</a><br>
<br>
> Contact <a href="mailto:valgrind@valgrind.org" target="_blank">valgrind@valgrind.org</a> if you are happy to have your project added<br>
> to this list. Please provide a URL and a short description of your project.<br>
<br>
<br>
<br>
On Thu, Jul 23, 2015 at 9:44 AM, Matt Dowle <<a href="mailto:mattjdowle@gmail.com" target="_blank">mattjdowle@gmail.com</a>> wrote:<br>
<br>
> Hi Damian,<br>
> valgrind is reporting 3 issues and there's a https:// issue in the<br>
> vignette when run on win-builder. But all cran + bioconductor<br>
> packages downstream are checked ok and we're passing big endian as<br>
> emulated thanks to qemu so we can be sure to pass solaris sparc.<br>
> Hard to give an eta.<br>
> Matt<br>
><br>
><br>
> On Wed, Jul 22, 2015 at 3:10 AM, Damian Betebenner<br>
> <<a href="mailto:DBetebenner@nciea.org" target="_blank">DBetebenner@nciea.org</a>> wrote:<br>
> > Hi all,<br>
> ><br>
> > It was mentioned recently that 1.9.6 would be pushed to CRAN soon. Any<br>
> rough dates when that might occur?<br>
> ><br>
> > Alway appreciative for the great work!<br>
> ><br>
> > Damian<br>
> > _______________________________________________<br>
> > datatable-help mailing list<br>
> > <a href="mailto:datatable-help@lists.r-forge.r-project.org" target="_blank">datatable-help@lists.r-forge.r-project.org</a><br>
> ><br>
> <a href="https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/datatable-help" rel="noreferrer" target="_blank">https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/datatable-help</a><br>
> _______________________________________________<br>
> datatable-help mailing list<br>
> <a href="mailto:datatable-help@lists.r-forge.r-project.org" target="_blank">datatable-help@lists.r-forge.r-project.org</a><br>
> <a href="https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/datatable-help" rel="noreferrer" target="_blank">https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/datatable-help</a><br>
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------------------------------<br>
<br>
Message: 4<br>
Date: Wed, 5 Aug 2015 12:07:25 -0700<br>
From: Matt Dowle <<a href="mailto:mattjdowle@gmail.com" target="_blank">mattjdowle@gmail.com</a>><br>
To: <a href="mailto:gleynes%2Br@gmail.com" target="_blank">gleynes+r@gmail.com</a><br>
Cc: Damian Betebenner <<a href="mailto:DBetebenner@nciea.org" target="_blank">DBetebenner@nciea.org</a>>,<br>
"<a href="mailto:datatable-help@lists.r-forge.r-project.org" target="_blank">datatable-help@lists.r-forge.r-project.org</a>"<br>
<<a href="mailto:datatable-help@lists.r-forge.r-project.org" target="_blank">datatable-help@lists.r-forge.r-project.org</a>><br>
Subject: Re: [datatable-help] Any date for 1.9.6 push to CRAN?<br>
Message-ID:<br>
<CAOuOy3c4o=<a href="mailto:RC10%2BhaV-b5OibL23q4sm7EADMv5w-gF-Kz7v0gA@mail.gmail.com" target="_blank">RC10+haV-b5OibL23q4sm7EADMv5w-gF-Kz7v0gA@mail.gmail.com</a>><br>
Content-Type: text/plain; charset=UTF-8<br>
<br>
That would be great. Here's how to run through valgrind on Ubuntu.<br>
<br>
R CMD build data.table<br>
R CMD INSTALL data.table_1.9.5.tar.gz<br>
sudo apt-get install valgrind<br>
R -d "valgrind --tool=memcheck --leak-check=full" --vanilla<br>
require(data.table)<br>
require(bit64)<br>
test.data.table()<br>
options(datatable.verbose=TRUE)<br>
test.data.table()<br>
<br>
Matt<br>
<br>
<br>
<br>
On Wed, Aug 5, 2015 at 11:24 AM, Gene Leynes <<a href="mailto:gleynes%2Br@gmail.com" target="_blank">gleynes+r@gmail.com</a>> wrote:<br>
> I was also hoping to find out the next push date. There have been some<br>
> significant bug fixes since last October!<br>
><br>
> Any way that someone (maybe even me) can help on the outstanding issues?<br>
><br>
> I went to the valgrind site hoping to find the issues, but I guess there's<br>
> no way to see the tests unless you're the admin?<br>
><br>
><br>
> Thanks,<br>
><br>
> Gene<br>
><br>
> PS: valgrind should link to data.table too!<br>
> <a href="http://valgrind.org/gallery/users.html#scientific" rel="noreferrer" target="_blank">http://valgrind.org/gallery/users.html#scientific</a><br>
>><br>
>> Contact <a href="mailto:valgrind@valgrind.org" target="_blank">valgrind@valgrind.org</a> if you are happy to have your project added<br>
>> to this list. Please provide a URL and a short description of your project.<br>
><br>
><br>
><br>
> On Thu, Jul 23, 2015 at 9:44 AM, Matt Dowle <<a href="mailto:mattjdowle@gmail.com" target="_blank">mattjdowle@gmail.com</a>> wrote:<br>
>><br>
>> Hi Damian,<br>
>> valgrind is reporting 3 issues and there's a https:// issue in the<br>
>> vignette when run on win-builder. But all cran + bioconductor<br>
>> packages downstream are checked ok and we're passing big endian as<br>
>> emulated thanks to qemu so we can be sure to pass solaris sparc.<br>
>> Hard to give an eta.<br>
>> Matt<br>
>><br>
>><br>
>> On Wed, Jul 22, 2015 at 3:10 AM, Damian Betebenner<br>
>> <<a href="mailto:DBetebenner@nciea.org" target="_blank">DBetebenner@nciea.org</a>> wrote:<br>
>> > Hi all,<br>
>> ><br>
>> > It was mentioned recently that 1.9.6 would be pushed to CRAN soon. Any<br>
>> > rough dates when that might occur?<br>
>> ><br>
>> > Alway appreciative for the great work!<br>
>> ><br>
>> > Damian<br>
>> > _______________________________________________<br>
>> > datatable-help mailing list<br>
>> > <a href="mailto:datatable-help@lists.r-forge.r-project.org" target="_blank">datatable-help@lists.r-forge.r-project.org</a><br>
>> ><br>
>> > <a href="https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/datatable-help" rel="noreferrer" target="_blank">https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/datatable-help</a><br>
>> _______________________________________________<br>
>> datatable-help mailing list<br>
>> <a href="mailto:datatable-help@lists.r-forge.r-project.org" target="_blank">datatable-help@lists.r-forge.r-project.org</a><br>
>><br>
>> <a href="https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/datatable-help" rel="noreferrer" target="_blank">https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/datatable-help</a><br>
><br>
><br>
><br>
<br>
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End of datatable-help Digest, Vol 66, Issue 4<br>
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</blockquote></div></div></div>