[datatable-help] merging output to one data file

[Papysounours]

Hi I wrote this small script in order to be able to analyze read from CHIP
seq data. This script allow me to get from one read sequence all the
possible combination by removing a base at each side of the read until no
base are left. my issue is that I dont find the way to pull all the output
into one csv or xls file with the name of the sample (read name) and the
full list of combination.script#j=1#nr<-nrow(seq2)#n=1#while (n<nr) { 
#p<-str_length(seq2[n,2])  #i<-1:p  #while (j<=p) {
seqpart<-(str_sub(seq2[n,2], start=i[i], end=-j))#print(seq2[n,1])#out.files
<-seqpart#write.csv(seqpart, out.files[n])#j=j+1#}#j=1#n=n+1#print(n)#}I am
sure that we have better ways to do that, but I am just a beginner in
R.....My input are a excel spread shit 	name	seq1.s	Col31	AA1	CAAGGCGCGCGT
AE2	AB1	GGTACACAATATATGGTGTGCGTGCGTGCG	AF mod3	AC1	AGTGCGTGAAAACCGTC	AI4	AD1
AAAGTGTGTGCCACAC	AG5	AE1	TGACTGACT	AB6	AF1	TAGTTGCAACGTTGCAGCGTTGCA	AH full7
AG1	AACGCGCCGTTAACGTTGACACGTGTGT	AD mod8	AH1	ACGTGGAGTGCGTGTGTACACGTGTG	Ai
full9	AI1	TGAACAGTGGTACGTACATGCGTACGTTAACG	AC longer10	AJ1
CATGCATGCATGCATGCAT	AAand the ouput I can get for the first sequence is for
one run
"","x""1","CAAGGCGCGCGT""2","AAGGCGCGCGT""3","AGGCGCGCGT""4","GGCGCGCGT""5","GCGCGCGT""6","CGCGCGT""7","GCGCGT""8","CGCGT""9","GCGT""10","CGT""11","GT""12","T"with
this script I am getting a number of file according to p. I would like to
merge all the file from one sequence to one first, remove all duplicate like
"" and then merge all the file together with gene or read name and full list
of possible combination in order to extract from all the possible
combination repeat pattern.Thanks a lotPAPY  



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