[datatable-help] FR #5249 - rbindlist gains use.names and fill arguments

Gabor Grothendieck ggrothendieck at gmail.com
Tue May 20 22:04:01 CEST 2014


The requirement to set use.names to TRUE if fill is TRUE seems ugly.
I suggest that fill be the default for use.names.

On Tue, May 20, 2014 at 3:27 PM, Arunkumar Srinivasan
<aragorn168b at gmail.com> wrote:
> Hello everyone,
>
> With the latest commit #1266, the extra functionality offered via rbind
> (use.names and fill) is also now available to rbindlist. In addition, the
> implementation is completely moved to C, and is therefore tremendously fast,
> especially for cases where one has to bind using with use.names=TRUE and/or
> with fill=TRUE. I’ll try to put out a benchmark comparing speed differences
> with the older implementation ASAP.
>
> Note that this change comes with a very low cost to the default speed to
> rbindlist - with use.names=FALSE and fill=FALSE. As an example, binding
> 10,000 data.tables with 20 columns each, resulted in the new version running
> in 0.107 seconds, where as the older version ran in 0.095 seconds.
>
> In addition the documentation for ?rbindlist also has been improved (#5158
> from Alexander). Here’s the change log from NEWS:
>
>   o  'rbindlist' gains 'use.names' and 'fill' arguments and is now
> implemented entirely in C. Closes #5249
>          -> use.names by default is FALSE for backwards compatibility
> (doesn't bind by names by default)
>          -> rbind(...) now just calls rbindlist() internally, except that
> 'use.names' is TRUE by default,
>             for compatibility with base (and backwards compatibility).
>          -> fill by default is FALSE. If fill is TRUE, use.names has to be
> TRUE.
>          -> At least one item of the input list has to have non-null column
> names.
>          -> Duplicate columns are bound in the order of occurrence, like
> base.
>          -> Attributes that might exist in individual items would be lost in
> the bound result.
>          -> Columns are coerced to the highest SEXPTYPE, if they are
> different, if/when possible.
>          -> And incredibly fast ;).
>          -> Documentation updated in much detail. Closes DR #5158.
>      Eddi's (excellent) work on finding factor levels, type coercion of
> columns etc. are all retained.
>
> Please try it and write back if things aren’t working as it was before. The
> tests that had to be fixed are extremely rare cases. I suspect there should
> be minimal issue, if at all, in this version. However, I do find the changes
> here bring consistency to the function.
>
> One (very rare) feature that is not available due to this implementation is
> the ability to recycle.
>
> dt1 <- data.table(x=1:3, y=4:6, z=list(1:2, 1:3, 1:4))
> lst1 <- list(x=4, y=5, z=as.list(1:3))
>
> rbind(dt1, lst1)
> #    x y       z
> # 1: 1 4     1,2
> # 2: 2 5   1,2,3
> # 3: 3 6 1,2,3,4
> # 4: 4 5       1
> # 5: 4 5       2
> # 6: 4 5       3
>
> The 4,5 are recycled very nicely here.. This is not possible at the moment.
> This is because the earlier rbind implementation used as.data.table to
> convert to data.table, however it takes a copy (very inefficient on huge /
> many tables). I’d love to add this feature in C as well, as it would help
> incredibly for use within [.data.table (now that we can fill columns and
> bind by names faster). Will add a FR.
>
> In summary, I think there should be minimal issues, if any and should be
> much faster (for rbind cases). Please write back what you think, if you
> happen to try out.
>
>
>
> Arun
>
>
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