[datatable-help] data.table 1.4

Matthew Dowle mdowle at mdowle.plus.com
Sun Apr 18 15:47:42 CEST 2010


Quick update :

lin32 - build log last night has picked up rev 80, OK.
        check log patched: 'Logfile for data.table not available'
        check log devel: 'Logfile for data.table not available'
        install.packages() worked fine for me just now

lin64 - build log last night has picked up rev 80, OK.
        check log patched (i.e. R 2.10.1) : OK
        check log devel (i.e. R 2.12.0) : error 'y argument is missing'
        install.packages() : should be ok.

win32 - build log early this morning : still at rev 61, with errors
        check log yesterday afternoon : still at rev 61, with errors

mac   - build log : still at rev 61,  OK
        check log : picked up rev 80, OK

Not a lot I can do until the r-forge guys get back to us. At least it
seems ok (but not perfect) on the linux and mac side.  Just windows that
hasn't updated at all.


On Sat, 2010-04-17 at 20:34 +0100, Matthew Dowle wrote:
> Thanks for looking Tom - the extra eyes much appreciated.
> 
> Looked into it some more. Heres a full run down ...
> 
> All 4 build logs (lin32, lin64, win and mac) state svn rev 61 at the top
> (i.e. not up to date). Heres the linux64 one :
> http://r-forge.r-project.org/R/?group_id=240&log=build_src&pkg=data.table&flavor=patched
> 
> For some reason, just on lin64, the check logs (but not the build logs -
> that is still at 61) *have* picked up rev 80.  [None of the check logs
> for the other systems (lin32, win32 or mac) have log files available.]
> 
> Interesting thing is that check log for *patched* (R 2.10.1) is OK on
> lin64. This has a very recent (i.e. late) timestamp of "Sat Apr 17
> 16:39:34 2010", about the same time you replied. I've just noticed it.
> http://r-forge.r-project.org/R/?group_id=240&log=check_x86_64_linux&pkg=data.table&flavor=patched
> 
> so its just devel (R 2.12.0) which has the error in test.data.table
> (same log you posted) on lin64 :
> http://r-forge.r-project.org/R/?group_id=240&log=check_x86_64_linux&pkg=data.table&flavor=devel 
> 
> That could be a bug in R 2.12.0-devel, rather than data.table. Or it
> could be a bug in data.table that becomes apparent in R 2.12, or perhaps
> due to a change in 2.12.   Good to have advance notice.
> 
> But the rest seems to be something up with R-forge.
> 
> Because R-forge has been growing in use so much (more packages, plus
> history growing in each package I guess) the exportation at 20:30 CET is
> taking longer and longer. The build machines start their rsync at a set
> time after that,  so if the rysnc starts before the exportation has
> finished, they miss the update.  Thats what Stefan told me last time
> this happened a month or so ago, something like that anyway.  I guess
> its tricky to coordinate the various machines and operating systems.
> They are about to release a new system to solve these problems which
> involves an intra-day build cycle.  In the meantime, we should (if I'm
> understanding correctly) see it all update tomorrow.... leaving us with
> a possible R 2.12.0 issue to investigate and report to r-devel (if its
> not already been detected).
> 
> Heres the ticket I raised to r-forge, if exra eyes help :
> 
> https://r-forge.r-project.org/tracker/?func=detail&aid=898&group_id=34&atid=194
> 
> I hadn't looked at the lin64 logs then, as I tend to just look at the
> lin32 one of the two linux columns.
> 
> 
> On Sat, 2010-04-17 at 12:20 -0400, Short, Tom wrote:
> > Matthew, it seemed to error in test.data.table according to this link:
> > 
> >  
> > 
> > http://r-forge.r-project.org/R/?group_id=240&log=check_x86_64_linux&pkg=data.table&flavor=devel 
> > 
> >  
> > 
> > - Tom
> > 
> >  
> > 
> > -----Original Message-----
> > From: datatable-help-bounces at lists.r-forge.r-project.org
> > [mailto:datatable-help-bounces at lists.r-forge.r-project.org] On Behalf
> > Of Matthew Dowle
> > Sent: Saturday, April 17, 2010 10:09 AM
> > To: datatable-help at lists.r-forge.r-project.org
> > Subject: [datatable-help] data.table 1.4
> > 
> >  
> > 
> > 1.4 is merged to mainline now.
> > 
> >  
> > 
> > Main change is further speed improvements for grouping e.g. 10 times
> > 
> > faster than tapply and aggregate.
> > 
> >  
> > 
> > Although the r-forge package tab displays its at 1.4, it seems it
> > didn't
> > 
> > fully update behind the scenes last night, have raised ticket.
> > Similar
> > 
> > things have happened before, and if its the same, it should hopefully
> > 
> > update tonight. In the meantime, install.packages() will probably
> > still
> > 
> > grab v1.3.  It might even install v1.3 but report that its installed
> > 
> > v1.4.  Will check again tomorrow.
> > 
> >  
> > 
> > Matthew
> > 
> >  
> > 
> >  
> > 
> >  
> > 
> > _______________________________________________
> > 
> > datatable-help mailing list
> > 
> > datatable-help at lists.r-forge.r-project.org
> > 
> > https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/datatable-help
> > 
> > 
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> 
> 
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