<html><body><div style="color:#000; background-color:#fff; font-family:times new roman, new york, times, serif;font-size:18pt"><div><span>Dear Damien,</span></div><div style="color: rgb(0, 0, 0); font-size: 24px; font-family: 'times new roman', 'new york', times, serif; background-color: transparent; font-style: normal; "><span><br></span></div><div style="color: rgb(0, 0, 0); font-size: 24px; font-family: 'times new roman', 'new york', times, serif; background-color: transparent; font-style: normal; "><span>Ok, thanks! Just another thing... I'm not sure if you received my anterior message. </span> I tried to get the var importances of a consensus model using something like getModelsVarImport() to an object created by the BIOMOD_EnsembleModeling() function but it was not possible. Is there any way to get these information? Also, will be possible to get the response plots for this same object?</div><div style="color: rgb(0, 0, 0);
font-size: 24px; font-family: 'times new roman', 'new york', times, serif; background-color: transparent; font-style: normal; "><br></div><div style="color: rgb(0, 0, 0); font-size: 24px; font-family: 'times new roman', 'new york', times, serif; background-color: transparent; font-style: normal; ">Cheers,</div><div> </div><div>Pablo Riul<br><br>Departamento de Engenharia e Meio Ambiente<br>Centro de Ciências Aplicadas e Educação<br>Universidade Federal da Paraíba - Campus IV<br>R: Mangueira s/n, Centro CEP: 58.297-000<br>Rio Tinto - Paraíba - Brasil</div><div><br></div> <div style="font-size: 18pt; font-family: 'times new roman', 'new york', times, serif; "> <div style="font-size: 12pt; font-family: 'times new roman', 'new york', times, serif; "> <div dir="ltr"> <font size="2" face="Arial"> <hr size="1"> <b><span style="font-weight:bold;">De:</span></b> Damien Georges <damien.georges2@gmail.com><br> <b><span style="font-weight:
bold;">Para:</span></b> biomod-commits@lists.r-forge.r-project.org; Pablo Riul <pabloriul@yahoo.com.br> <br> <b><span style="font-weight: bold;">Enviadas:</span></b> Quarta-feira, 12 de Setembro de 2012 10:52<br> <b><span style="font-weight: bold;">Assunto:</span></b> Re: [Biomod-commits] Warning in BIOMOD_FormatingData<br> </font> </div> <br><div id="yiv741630193">
<div>
<div class="yiv741630193moz-cite-prefix">Dear Pablo,<br>
<br>
Don't worry about it.. It's just a warning indicating that some
function of raster package have changed of names.. <br>
I took this into account in the last biomod2 version so warnings
will disappear when you'll update the package .<br>
<br>
Best,<br>
<br>
Damien <br>
<br>
On 12/09/2012 14:46, Pablo Riul wrote:<br>
</div>
<blockquote type="cite">
<div style="color: rgb(0, 0, 0); background-color: rgb(255, 255, 255); font-size: 18pt; font-family: 'times new roman', 'new york', times, serif; ">
<div><span>Dear list,</span></div>
<div style="color: rgb(0, 0, 0); font-size: 24px; background-color: transparent; font-style: normal; font-family: 'times new roman', 'new york', times, serif; "><span><br>
</span></div>
<div style="color: rgb(0, 0, 0); font-size: 24px; background-color: transparent; font-style: normal; font-family: 'times new roman', 'new york', times, serif; "><span>I updated my packages
and I'm now using raster 2.0-12. When I created myBiomodData
using the BIOMOD_FormatingData function I received the
warning below:</span></div>
<div style="color: rgb(0, 0, 0); font-size: 24px; background-color: transparent; font-style: normal; font-family: 'times new roman', 'new york', times, serif; "><span><br>
</span></div>
<div style="color: rgb(0, 0, 0); font-size: 24px; background-color: transparent; font-style: normal; font-family: 'times new roman', 'new york', times, serif; "><span>
<div style="margin:0.0px 0.0px 0.0px 0.0px;font:14.2px Monaco;color:#1c39f6;"><span style="color:#99228d;">>
</span>myBiomodData <- BIOMOD_FormatingData(resp.var =
myResp,expl.var = myExpl,resp.xy = myRespXY,resp.name =
myRespName,PA.nb.rep = 1,PA.nb.absences = 1000,PA.strategy
= 'random')</div>
<div style="margin:0.0px 0.0px 0.0px 0.0px;font:14.2px Monaco;min-height:19.0px;"><br>
</div>
<div style="margin:0.0px 0.0px 0.0px 0.0px;font:14.2px Monaco;">-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Mhisp Data Formating
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=</div>
<div style="margin:0.0px 0.0px 0.0px 0.0px;font:14.2px Monaco;min-height:19.0px;"><br>
</div>
<div style="margin:0.0px 0.0px 0.0px 0.0px;font:14.2px Monaco;"> ! No data has been set aside for modeling
evaluation</div>
<div style="margin:0.0px 0.0px 0.0px 0.0px;font:14.2px Monaco;"> > Pseudo Absences Selection checkings...</div>
<div style="margin:0.0px 0.0px 0.0px 0.0px;font:14.2px Monaco;"> > random pseudo absences selection</div>
<div style="margin:0.0px 0.0px 0.0px 0.0px;font:14.2px Monaco;"> > Pseudo absences are selected in
explanatory variables</div>
<div style="margin:0.0px 0.0px 0.0px 0.0px;font:14.2px Monaco;">-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Done
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=</div>
<div style="margin:0.0px 0.0px 0.0px 0.0px;font:14.2px Monaco;color:#ff1f17;">Warning message:</div>
<div style="margin:0.0px 0.0px 0.0px 0.0px;font:14.2px Monaco;color:#ff1f17;">In .local(x, rcl, ...) :</div>
<div style="margin:0.0px 0.0px 0.0px 0.0px;font:14.2px Monaco;color:#ff1f17;"> raster function "reclass" has
been deprecated and will be removed from the package;</div>
<div style="margin:0.0px 0.0px 0.0px 0.0px;font:14.2px Monaco;color:#ff1f17;">Please use "reclassify" instead</div>
<div style="margin:0.0px 0.0px 0.0px 0.0px;font:14.2px Monaco;color:#ff1f17;"><br>
</div>
<div style="margin:0.0px 0.0px 0.0px 0.0px;font:14.2px Monaco;color:#ff1f17;"><br>
</div>
</span></div>
<div>Its not a problem now, but maybe in next updates of package
raster the reclass function may be not available anymore.</div>
<div><br>
</div>
<div style="color: rgb(0, 0, 0); font-size: 24px; background-color: transparent; font-style: normal; font-family: 'times new roman', 'new york', times, serif; ">Cheers,</div>
<div style="color: rgb(0, 0, 0); font-size: 24px; background-color: transparent; font-style: normal; font-family: 'times new roman', 'new york', times, serif; "> </div>
<div>Pablo Riul<br>
<br>
Departamento de Engenharia e Meio Ambiente<br>
Centro de Ciências Aplicadas e Educação<br>
Universidade Federal da Paraíba - Campus IV<br>
R: Mangueira s/n, Centro CEP: 58.297-000<br>
Rio Tinto - Paraíba - Brasil</div>
</div>
<br>
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<br>
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