<html><head></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div>Hi Daisy,</div><div>Yes, there is no real need to store the SRE information because it is very simple and little time consuming to retrieve it automatically.</div><div>Every time you run the Projection function for instance with SRE, it is re-run instead of loading the information like for the other models. </div><div>Best</div><div>Wilfried</div><div><br></div><div><br></div><br><div><div>Le 2 déc. 2009 à 05:15, Daisy Englert Duursma a écrit :</div><br class="Apple-interchange-newline"><blockquote type="cite"><div>Hello again,<br><br>After reading the help file again, I realize that "Each model<br>(excepted SRE) generates an object storing the different<br>parameterisation, the im-<br>portance of each variable (for GBM, GAM, randomForest), and the ANOVA<br>for variable significance<br>(GLM, GAM), and so on. This output is essential as it allows<br>generating predictions, to know which<br>variable has been selected and so on.."<br><br><br><br>Thanks,<br><br>Daisy<br><br><br><br><br><br>On Wed, Dec 2, 2009 at 11:40 AM, Daisy Englert Duursma<br><<a href="mailto:daisy.duursma@gmail.com">daisy.duursma@gmail.com</a>> wrote:<br><blockquote type="cite">Greetings,<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">I have encountered a weird problem with the SRE model. SRE runs fine<br></blockquote><blockquote type="cite">in my script as well as in the BIOMOD exercise but it does not seem to<br></blockquote><blockquote type="cite">write the files needed to back load the models. So in my case I have<br></blockquote><blockquote type="cite">no SRE files in:<br></blockquote><blockquote type="cite">c:\xxx\xxx\BIOMOD_1.1-3\ex1\models\<br></blockquote><blockquote type="cite">There should be files something like SP281_SRE_PA1<br></blockquote><blockquote type="cite">I believe the function models is calculating SRE because I have<br></blockquote><blockquote type="cite">results for SRE in VarImportance and it is evaluated in run details in<br></blockquote><blockquote type="cite">R.<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">I am not alone on this problem and my colleagues have had the same problem.<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">Thank you for any input,<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">Daisy Englert<br></blockquote><blockquote type="cite">Macquarie University<br></blockquote><blockquote type="cite">Sydney, NSW<br></blockquote><blockquote type="cite"><br></blockquote>_______________________________________________<br>Biomod-commits mailing list<br><a href="mailto:Biomod-commits@lists.r-forge.r-project.org">Biomod-commits@lists.r-forge.r-project.org</a><br>https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/biomod-commits<br></div></blockquote></div><br><div>
<span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: medium; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: medium; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div><span class="Apple-style-span" style="font-size: 12px; "><div>--------------------------</div><div>Dr. Wilfried Thuiller</div><div>Laboratoire d'Ecologie Alpine, UMR CNRS 5553</div><div>Université Joseph Fourier</div><div>BP53, 38041 Grenoble cedex 9, France</div><div>tel: +33 (0)4 76 63 54 53</div><div>fax: +33 (0)4 76 51 42 79</div><div><br></div><div>Email: <a href="mailto:wilfried.thuiller@ujf-grenoble.fr">wilfried.thuiller@ujf-grenoble.fr</a><br>Home page: <a href="http://www.will.chez-alice.fr/">http://www.will.chez-alice.fr</a><br>Website: <a href="http://www-leca.ujf-grenoble.fr/equipes/tde.htm">http://www-leca.ujf-grenoble.fr/equipes/tde.htm</a><br><br>FP6 European MACIS project: <a href="http://www.macis-project.net/">http://www.macis-project.net</a><br>FP6 European EcoChange project: <a href="http://www.ecochange-project.eu/">http://www.ecochange-project.eu</a></div><div><br></div></span></div></div></span><br class="Apple-interchange-newline"></span><br class="Apple-interchange-newline">
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