<html><head><meta http-equiv="Content-Type" content="text/html charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Dear Tomas,<div class=""><br class=""></div><div class=""> What version of BaSTA are you using? <br class=""><div class="">
<div style="color: rgb(0, 0, 0); letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class=""><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class=""><br class="Apple-interchange-newline">Best,</div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class=""><br class=""></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class=""> Fernando</div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class=""><br class=""></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class=""><div class="" style="font-size: 12px; orphans: 2; widows: 2;"><b class="">Fernando Colchero</b></div><div class="" style="font-size: 12px; orphans: 2; widows: 2;">Associate Professor</div><div class="" style="font-size: 12px; orphans: 2; widows: 2;">Department of Mathematics and Computer Science</div><div class="" style="font-size: 12px; orphans: 2; widows: 2;">Max-Planck Odense Center on the Biodemography of Aging</div><div class="" style="font-size: 12px; orphans: 2; widows: 2;"><b class=""><i class=""><br class=""></i></b></div><div class="" style="font-size: 12px; orphans: 2; widows: 2;">Tlf. +45 65 50 23 24</div><div class="" style="font-size: 12px; orphans: 2; widows: 2;">Email <a href="mailto:colchero@imada.sdu.dk" class="">colchero@imada.sdu.dk</a></div><div class="" style="font-size: 12px; orphans: 2; widows: 2;">Web <a href="http://www.sdu.dk/staff/colchero" class="">www.sdu.dk/staff/colchero</a></div><div class="" style="font-size: 12px; orphans: 2; widows: 2;">Pers. web <a href="http://www.sdu.dk/staff/colchero" class="">www.colchero.com</a></div><div class="" style="font-size: 12px; orphans: 2; widows: 2;">Adr. Campusvej 55, 5230, Odense, Dk</div><div class="" style="font-size: 12px; orphans: 2; widows: 2;"><br class=""></div><div class="" style="font-size: 12px; orphans: 2; widows: 2;"><b class="">University of Southern Denmark</b></div></div></div>
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<br class=""><div><blockquote type="cite" class=""><div class="">On 2 Nov 2016, at 10:41, Tomáš Přívětivý <<a href="mailto:privetivy.tomas@gmail.com" class="">privetivy.tomas@gmail.com</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><meta http-equiv="Content-Type" content="text/html; charset=utf-8" class=""><div dir="ltr" class=""><p class="MsoNormal"><span lang="CS" class=""><font face="tahoma, sans-serif" class="">Dear BaSTA team,<span class=""></span></font></span></p><p class="MsoNormal"><span lang="CS" class=""><font face="tahoma, sans-serif" class=""><br class=""></font></span></p><p class="MsoNormal"><span lang="CS" class=""><font face="tahoma, sans-serif" class="">Nowadays this bug
come to my work with package BaSTA. It is firstime since I´m working with your
package for third year. Here is output after analyzis:</font><span class=""></span></span></p><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><span style="font-size: 10pt; font-family: 'lucida console'; background-color: rgb(225, 226, 229); background-position: initial initial; background-repeat: initial initial;" class="">Total MCMC computing time: 19.46 mins.<span class=""></span></span></p><div style="margin-bottom: 0.0001pt; line-height: normal; word-break: break-all;" class=""><span style="font-size: 10pt; font-family: 'lucida console'; background-color: rgb(225, 226, 229); background-position: initial initial; background-repeat: initial initial;" class=""><span class=""> </span></span><br class="webkit-block-placeholder"></div><div style="margin-bottom: 0.0001pt; line-height: normal; word-break: break-all;" class=""><span style="font-size: 10pt; font-family: 'lucida console'; background-color: rgb(225, 226, 229); background-position: initial initial; background-repeat: initial initial;" class=""><span class=""> </span></span><br class="webkit-block-placeholder"></div><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><span style="font-size: 10pt; font-family: 'lucida console'; background-color: rgb(225, 226, 229); background-position: initial initial; background-repeat: initial initial;" class="">Calculating DIC... done<span class=""></span></span></p><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><span style="font-size: 10pt; font-family: 'lucida console'; background-color: rgb(225, 226, 229); background-position: initial initial; background-repeat: initial initial;" class="">Survival parameters converged appropriately. <span class=""></span></span></p><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><span style="font-size: 10pt; font-family: 'lucida console'; background-color: rgb(225, 226, 229); background-position: initial initial; background-repeat: initial initial;" class="">DIC was calculated.<span class=""></span></span></p><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><span style="font-size:10pt;font-family:"lucida console";color:rgb(197,6,11);background-image:initial;background-position:initial;background-size:initial;background-repeat:initial;background-origin:initial;background-clip:initial;background-color:rgb(225,226,229)" class="">Error in `colnames<-`(`*tmp*`, value =
c("b0", "b1")) : <span class=""></span></span></p><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><span style="font-size:10pt;font-family:"lucida console";color:rgb(197,6,11);background-image:initial;background-position:initial;background-size:initial;background-repeat:initial;background-origin:initial;background-clip:initial;background-color:rgb(225,226,229)" class="">
length of 'dimnames' [2] not equal to array extent<span class=""></span></span></p><div style="margin-bottom: 0.0001pt; line-height: normal; word-break: break-all;" class=""><span lang="CS" class=""> </span><br class="webkit-block-placeholder"></div><div style="margin-bottom: 0.0001pt; line-height: normal; word-break: break-all;" class=""><span lang="CS" class=""> </span><br class="webkit-block-placeholder"></div><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><br class=""></p><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><span lang="CS" class=""><font face="tahoma, sans-serif" class="">I found
solution for the problem in previous messages here<span class=""></span></font></span></p><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><font face="tahoma, sans-serif" class=""><a href="http://lists.r-forge.r-project.org/pipermail/basta-users/2013-September/000086.html" class=""><span lang="CS" class="">http://lists.r-forge.r-project.org/pipermail/basta-users/2013-September/000086.html</span></a><span lang="CS" class=""><span class=""></span></span></font></p><div style="margin-bottom: 0.0001pt; line-height: normal; word-break: break-all;" class=""><span lang="CS" class=""><font face="tahoma, sans-serif" class=""> </font></span><br class="webkit-block-placeholder"></div><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><span lang="CS" class=""><font face="tahoma, sans-serif" class="">But I´m not
able to aply this solution for my analyzis. Could you help me, please?<span class=""></span></font></span></p><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><span lang="CS" class=""><font face="tahoma, sans-serif" class="">I attached matrixes and R script used. It is interesting that first time in new R session
everything going smoothly and then this bug came just like that. </font></span><span style="font-size: 10pt; font-family: 'lucida console'; background-color: rgb(225, 226, 229); background-position: initial initial; background-repeat: initial initial;" class=""><span class=""></span></span></p><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><span lang="CS" class=""><font face="tahoma, sans-serif" class=""><br class=""></font></span></p><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><span lang="CS" class=""><font face="tahoma, sans-serif" class="">Best regards,</font></span></p><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><font face="tahoma, sans-serif" class="">Tomáš</font></p><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><font face="tahoma, sans-serif" class=""><br class=""></font></p><p class="MsoNormal" style="margin-bottom:0.0001pt;line-height:normal;word-break:break-all"><font face="tahoma, sans-serif" class=""><br class=""></font></p></div>
<span id="cid:1D2616AF-BBBC-464A-A36B-966E9B75049E"><birthDeath_elevation.txt></span><span id="cid:1F42B3A7-6E0A-43F1-8D1C-A88C0DA1ECDD"><censusMat_elevation.txt></span><span id="cid:6A7E412D-BE75-474F-A11D-F2E43E183185"><covMat_elevation.txt></span><span id="cid:2044C998-9FA8-4C5A-A586-193904FD1E91"><Script_elevation.R></span>_______________________________________________<br class="">Basta-users mailing list<br class=""><a href="mailto:Basta-users@lists.r-forge.r-project.org" class="">Basta-users@lists.r-forge.r-project.org</a><br class="">https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/basta-users<br class=""></div></blockquote></div><br class=""></div></body></html>