<html><head><meta http-equiv="Content-Type" content="text/html charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Dear Achaz,<div class=""><br class=""></div><div class=""> First of all, sorry for the late reply. I suspect that you might have NA’s in your data, maybe with your covariates. Could this be the case?<br class=""><div class="">
<div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 16px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; orphans: 2; widows: 2;" class=""><br class="Apple-interchange-newline">Best,</div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 16px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; orphans: 2; widows: 2;" class=""><br class=""></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 16px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; orphans: 2; widows: 2;" class="">Fernando<br class="Apple-interchange-newline"><br class=""></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; font-size: 12px; orphans: 2; widows: 2;" class=""><b class="">Fernando Colchero</b></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; font-size: 12px; orphans: 2; widows: 2;" class="">Assistant Professor</div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; font-size: 12px; orphans: 2; widows: 2;" class="">Department of Mathematics and Computer Science</div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; font-size: 12px; orphans: 2; widows: 2;" class="">Max-Planck Odense Center on the Biodemography of Aging</div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; font-size: 12px; orphans: 2; widows: 2;" class=""><b class=""><i class=""><br class=""></i></b></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; font-size: 12px; orphans: 2; widows: 2;" class="">Tlf. +45 65 50 23 24</div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; font-size: 12px; orphans: 2; widows: 2;" class="">Email <a href="mailto:colchero@imada.sdu.dk" class="">colchero@imada.sdu.dk</a></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; font-size: 12px; orphans: 2; widows: 2;" class="">Web <a href="http://www.sdu.dk/staff/colchero" class="">www.sdu.dk/staff/colchero</a></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; font-size: 12px; orphans: 2; widows: 2;" class="">Pers. web <a href="http://www.sdu.dk/staff/colchero" class="">www.colchero.com</a></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; font-size: 12px; orphans: 2; widows: 2;" class="">Adr. Campusvej 55, 5230, Odense, Dk</div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; font-size: 12px; orphans: 2; widows: 2;" class=""><br class=""></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; font-size: 12px; orphans: 2; widows: 2;" class=""><b class="">University of Southern Denmark</b></div>
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<br class=""><div><blockquote type="cite" class=""><div class="">On 09 Jun 2015, at 16:10, Achaz von Hardenberg <<a href="mailto:achaz.hardenberg@pngp.it" class="">achaz.hardenberg@pngp.it</a>> wrote:</div><br class="Apple-interchange-newline"><div class="">
<meta http-equiv="Content-Type" content="text/html; charset=us-ascii" class=""><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Hi,<div class=""><br style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class=""><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class="">I am trying the simplest possible analysis with BaSTA with my own data using the following comand:</div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class=""><br class=""></div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class="">out<-basta(object=marmot.dat,studyStart=2007,studyEnd=2014)</div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class=""><br class=""></div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class="">but it gives me the following error message:</div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class=""><br class=""></div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class=""><div class="">No problems were detected with the data.</div><div class=""><br class=""></div><div class="">Starting simulation to find jump sd's... </div><div class="">Error in if (acceptCrit > acceptProb) { : </div><div class=""> missing value where TRUE/FALSE needed</div></div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class=""><br class=""></div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class="">DataCheck tells me that the data is fine. </div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class="">Anyone knows how to fix this?</div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class=""><br class=""></div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class="">Thanks a lot,</div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class=""><br class=""></div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class="">Achaz von Hardenberg </div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class=""><i class="">Alpine Wildlife Research Centre</i></div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class=""><i class="">Gran Paradiso National Park</i></div><div style="color: rgb(34, 34, 34); font-family: arial, sans-serif; font-size: small; widows: 1; background-color: rgb(255, 255, 255);" class=""><br class=""></div></div></div>_______________________________________________<br class="">Basta-users mailing list<br class=""><a href="mailto:Basta-users@lists.r-forge.r-project.org" class="">Basta-users@lists.r-forge.r-project.org</a><br class="">https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/basta-users<br class=""></div></blockquote></div><br class=""></div></body></html>