<html><head></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">It seems as though, during the basta run, R is requesting access a CRAN repository that is unavailable.<div>It is a warning message, and your basta run should have worked OK.</div><div><br><div>I'm not sure why it would do that, but if you select an available repository BEFORE you run basta (i.e. when you start up R) it should then work fine without a warning message.</div><div><br></div><div>You can do that in R's preferences.</div><div><br></div><div>Cheers,</div><div>Owen</div></div><div><br></div><div><div>On 8 Nov 2011, at 12:02, Cliff Cunningham wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">Dear Basta,<div><br><div><span class="Apple-tab-span" style="white-space:pre"> </span>Since last evening, I have been receiving this message when I try to run basta in parallel (I don't have system leopard)</div><div><br></div><div><div>No problems were detected with the data.</div><div>Multiple simulations started...</div><div>Warning: unable to access index for repository <a href="http://www.ibiblio.org/pub/languages/R/CRAN/bin/macosx/leopard/contrib/2.12">http://www.ibiblio.org/pub/languages/R/CRAN/bin/macosx/leopard/contrib/2.12</a></div><div><br></div><div>here is my command line</div><div><br></div><div><div>out <- basta(object = Males.dat$newData, studyStart = 1978, studyEnd = 1982, model="WE" ,burnin=1000 ,niter=10000, nsim=4,parallel=TRUE, ncpus=4)</div></div><div><br></div><div>
<div style="font-size: 12px; "><span class="Apple-tab-span" style="white-space: pre; "> </span></div><div style="font-size: 12px; "><span class="Apple-tab-span" style="white-space: pre; "> </span>Thanks very much!</div><div style="font-size: 12px; "><br></div><div style="font-size: 12px; "> <span class="Apple-converted-space"> </span><span class="Apple-tab-span" style="white-space: pre; "> </span>Cliff Cunningham</div><div style="font-size: 12px; "><br></div><div style="font-size: 12px; "><br class="Apple-interchange-newline"> Professor</div><div style="font-size: 12px; "><span class="Apple-tab-span" style="white-space: pre; "> </span>Biology Department</div><div style="font-size: 12px; "> <span class="Apple-tab-span" style="white-space: pre; "> </span>Duke University</div><div style="font-size: 12px; "> 130 Science Drive</div><div style="font-size: 12px; "><span class="Apple-tab-span" style="white-space: pre; "> </span>Durham NC 27708<br class="webkit-block-placeholder"></div><div style="font-size: 12px; "><span class="Apple-tab-span" style="white-space: pre; "> </span>Phone 919-660-7356<br></div><div style="font-size: 12px; "><br></div><div style="font-size: 12px; "><a href="http://www.biology.duke.edu/cunningham">http://www.biology.duke.edu/cunningham</a></div><div style="font-size: 12px; "><br class="khtml-block-placeholder"></div><br class="Apple-interchange-newline"><br class="Apple-interchange-newline">
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