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<blockquote style="border:none;border-left:solid #CCCCCC 1.0pt;padding:0cm 0cm 0cm 6.0pt;margin-left:4.8pt;margin-right:0cm">
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">Hi everybody,<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">I’d like to compare null allele frequency on microsatellites estimated by Brookfield and Dempster algorithm as Dempster might be more accurate (see
Chapuis and Estoup, 2007)<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">To my knowledge, adegenet package calculate Chakraborty and Brookfield null allele frequencies. However, Dempster algorithm is not implemented nor
on adegent neither on any R package. Am I right ?<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">If it is so, do anyone knows or already have a script to convert genind/genpop to Genepop format (<a href="http://genepop.curtin.edu.au/help_input.html">http://genepop.curtin.edu.au/help_input.html</a>
) ?<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">Thank you very much for your help,<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">Cathy<o:p></o:p></span></p>
</blockquote>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Times",serif;color:black"><img border="0" width="107" height="44" style="width:1.1145in;height:.4583in" id="Image_x0020_2" src="cid:image001.jpg@01D46181.D440D0C0" alt="Description : cid:43BA2359-25C8-49EA-9D28-BCFD56FD115B@toulouse.inra.fr"></span><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"><br>
</span><b><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#8BAC21">_____________________________<br>
<br>
</span></b><b><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#A6CD39">Cathy Bouffartigue</span></b><b><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#8BAC21"><br>
</span></b><span style="font-size:8.0pt;font-family:"Arial",sans-serif;color:black">Doctorante/ PhD student<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"><a href="mailto:cathy.bouffartigue@inra.fr"><span style="font-family:"Arial",sans-serif">cathy.bouffartigue@inra.fr</span></a></span><b><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#A6CD39"><o:p></o:p></span></b></p>
<p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#A6CD39"><o:p> </o:p></span></b></p>
<p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#A6CD39">Centre Inra Occitanie-Toulouse<o:p></o:p></span></b></p>
<p class="MsoNormal"><span style="font-size:8.0pt;font-family:"Arial",sans-serif;color:black">Fixe : +33 (0)5 61 28 57 74</span><b><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#A6CD39">
<o:p></o:p></span></b></p>
<p class="MsoNormal"><span style="font-size:8.0pt;font-family:"Arial",sans-serif;color:black">Mobile : +33 (0)6 14 57 34 55<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:7.5pt;font-family:"Arial",sans-serif;color:black"><o:p> </o:p></span></p>
<p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#8BAC21">_____________________________<br>
</span></b><b><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#A6CD39"><br>
</span></b><span style="font-size:7.5pt;font-family:"Arial",sans-serif;color:black">Chemin de Borde Rouge CS 52627<br>
31326 Castanet Tolosan cedex<o:p></o:p></span></p>
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</span><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"><a href="http://www.toulouse.inra.fr/"><b><span style="font-size:10.0pt;color:#A6CD39">www.toulouse.inra.fr</span></b></a></span><b><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#A6CD39"><o:p></o:p></span></b></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"><o:p> </o:p></span></p>
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