<html><body><div style="font-family: trebuchet ms,sans-serif; font-size: 12pt; color: #000000"><div>Hi,</div><div><br data-mce-bogus="1"></div><div>it would be best if you could provide a reproducible example (data, code).</div><div><br data-mce-bogus="1"></div><div>Cheers,</div><div>Roman</div><div><br></div><div data-marker="__SIG_PRE__">----<br>In god we trust, all others bring data.</div><br><hr id="zwchr" data-marker="__DIVIDER__"><div data-marker="__HEADERS__"><b>From: </b>"shripathi bhat" <shripathipn@yahoo.co.in><br><b>To: </b>adegenet-forum@lists.r-forge.r-project.org<br><b>Sent: </b>Wednesday, April 4, 2018 4:49:16 PM<br><b>Subject: </b>[adegenet-forum] error using snapclust<br></div><br><div data-marker="__QUOTED_TEXT__"><div style="font-family:Helvetica Neue, Helvetica, Arial, sans-serif;font-size:16px;"><div><div>Hi, </div><div>I was trying to apply snapclust function on my genind object (from structure input file). Here I used prior K and pop.ini was factor of pop id (numbers) for all individuals. snapclust initially reads the geneind object and then exits with error "<span>Error in t(ll)[cbind(seq_along(group), as.integer(group))] : subscript out of bounds". I tried to google, but no luck. snapclust works perfectly when I use it with find.clusters (pop.ini =geneindobject$grp),<br></span><br></div><br><div class="ydpd343bc63signature"><div style="font-size:16px;"><div> </div><div>With regards, <br><b>Shri</b><b style="color:rgb(0, 0, 0);"><br><br></b></div></div></div></div></div><br>_______________________________________________<br>adegenet-forum mailing list<br>adegenet-forum@lists.r-forge.r-project.org<br>https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/adegenet-forum<br></div></div></body></html>