<html><head></head><body><div style="color:#000; background-color:#fff; font-family:times new roman, new york, times, serif;font-size:16px"><div id="yui_3_16_0_ym19_1_1495006544922_6870"><span></span></div><div></div><div id="yui_3_16_0_ym19_1_1495006544922_6869"> Hi!</div><div id="yui_3_16_0_ym19_1_1495006544922_6869" dir="ltr">I am using the adegenet package (the lastest version). I have 300 individuals and 275K SNP so I use the genlight object. I did everything in the tutorial for large SNP data (Eigthenvalues and PCA) but I don't know how to obtain a matrix structure to do my GWAS with mlmm.r or maybe GAPIT. I don't know If it's possible to obtain a stucture matrix with the genlight object in fact. </div><div class="signature" id="yui_3_16_0_ym19_1_1495006544922_6868"><br><div class="body undoreset" id="yui_3_16_0_ym19_1_1493803458995_83197" style="outline:none 0px;display:table;width:823px;padding-top:12px;padding-left:0px;"><div class="email-wrapped" id="yui_3_16_0_ym19_1_1493803458995_83199" style="display:table-cell;width:auto;word-wrap:break-word;"><div id="yiv6952697669"><div dir="ltr" id="yui_3_16_0_ym19_1_1493803458995_83198"><div class="yiv6952697669gmail_signature" id="yui_3_16_0_ym19_1_1493803458995_83208"><div dir="ltr" id="yui_3_16_0_ym19_1_1493803458995_83207"><div id="yui_3_16_0_ym19_1_1493803458995_83206"><div dir="ltr" id="yui_3_16_0_ym19_1_1493803458995_83205"><div dir="ltr" id="yui_3_16_0_ym19_1_1493803458995_83204"><div dir="ltr" id="yui_3_16_0_ym19_1_1493803458995_83203"><div id="yui_3_16_0_ym19_1_1493803458995_83202"><div id="yui_3_16_0_ym19_1_1493803458995_83201" style="margin-bottom:0.0001pt;padding:0px;line-height:normal;"><b id="yui_3_16_0_ym19_1_1493803458995_84087" style="color:rgb(156, 0, 92);"><span style="background-color:rgb(255, 255, 255);font-size:small;color:rgb(0, 0, 0);">----</span></b></div><div id="yui_3_16_0_ym19_1_1493803458995_83201" style="margin-bottom:0.0001pt;padding:0px;line-height:normal;"><b style="color:rgb(156, 0, 92);" id="yui_3_16_0_ym19_1_1495006544922_7029">BIABIANY Stella</b><span style="font-size:12pt;color:rgb(203, 0, 142);"> </span></div><div id="yui_3_16_0_ym19_1_1493803458995_83201" style="margin-bottom:0.0001pt;padding:0px;line-height:normal;"><span style="font-size:12pt;"></span></div><div id="yui_3_16_0_ym19_1_1493803458995_84084" style="margin-bottom:0.0001pt;padding:0px;line-height:normal;"><span id="yui_3_16_0_ym19_1_1493803458995_84085" style="font-size:12pt;">INRA-Angers, </span><span id="yui_3_16_0_ym19_1_1493803458995_84104" style="font-size:12pt;">42 Rue Georges Morel, 49070 Beaucouzé.</span><span id="yui_3_16_0_ym19_1_1493803458995_84083" style="font-size:12pt;"><br>Agrocampus-ouest, Université d'Angers (<a rel="nofollow" target="_blank" href="http://www.agrocampus-ouest.fr/" id="yui_3_16_0_ym19_1_1495006544922_6980">http://www.agrocampus-ouest.fr</a>, <a rel="nofollow" target="_blank" href="http://www.univ-angers.fr/" id="yui_3_16_0_ym19_1_1495006544922_8605">http://www.univ-angers.fr</a>)</span><span style="font-size:12pt;"></span></div><div id="yui_3_16_0_ym19_1_1493803458995_84074" style="margin-bottom:0.0001pt;padding:0px;line-height:normal;"><span id="yui_3_16_0_ym19_1_1493803458995_84079" style="font-size:12pt;">Phone : 0033 6 52 49 79 75</span><span style="font-size:12pt;"></span></div></div><div id="yui_3_16_0_ym19_1_1493803458995_83209"><font size="2">----</font></div><div id="yui_3_16_0_ym19_1_1493803458995_83209"><font color="#009900" face="Webdings">P</font><font color="#009900" face="verdana,arial,helvetica" id="yui_3_16_0_ym19_1_1493803458995_83210"> <span style="font-size:small;" id="yui_3_16_0_ym19_1_1495006544922_7030">Please consider the environment before printing this email.</span></font></div></div></div></div></div></div></div></div></div></div></div><div class="tictac-att-tray-base" id="yui_3_16_0_ym19_1_1493803458995_83151" style="margin-top:30px;"><div id="yui_3_16_0_ym19_1_1493803458995_83046" class="yui3-widget yui3-attachment-tray" style="padding:0px;border:none;clear:both;"><div id="yui_3_16_0_ym19_1_1493803458995_83048" class="yui3-attachment-tray-content"><div class="tictac-att white " id="yui_3_16_0_ym19_1_1493803458995_83057" style="margin:0px;padding:0px;position:relative;width:823px;background:rgb(255, 255, 255);border-top:0px solid rgb(236, 236, 236);"><div class="tictac-att-thumb-cover" id="yui_3_16_0_ym19_1_1493803458995_83115" style="margin:0px;padding:0px;position:relative;overflow:hidden;"></div></div></div></div></div></div></div></body></html>