<html><body><div style="font-family: trebuchet ms,sans-serif; font-size: 12pt; color: #000000"><div>What statistic are you trying to square off against number of SNPs?</div><div><br data-mce-bogus="1"></div><div>Cheers,</div><div>Roman</div><div><br></div><div data-marker="__SIG_PRE__">----<br>In god we trust, all others bring data.</div><br><hr id="zwchr" data-marker="__DIVIDER__"><div data-marker="__HEADERS__"><b>From: </b>"Hiren Ghosh" <hiren.ghosh@gmail.com><br><b>To: </b>adegenet-forum@lists.r-forge.r-project.org<br><b>Sent: </b>Tuesday, January 10, 2017 12:04:25 PM<br><b>Subject: </b>[adegenet-forum] Query about Adegene : How to get snp position plateau curve<br></div><br><div data-marker="__QUOTED_TEXT__"><div dir="ltr"><span style="font-size:12.8px">Hello Developer, Currently i am using your adegent package, in this way :</span><div>#data input from multi-genome-alignment file<br style="font-size:12.8px"><span style="font-size:12.8px">dna <- fasta2DNAbin(".</span><span style="font-size:12.8px">/core_gene_alignment.</span><span style="font-size:12.8px">fasta")</span><br style="font-size:12.8px"><span style="font-size:12.8px">D <- dist.dna(dna, model="N")</span><br style="font-size:12.8px"><span style="font-size:12.8px">clust <- gengraph(D)</span><br style="font-size:12.8px"><br style="font-size:12.8px"><br style="font-size:12.8px"><span style="font-size:12.8px">I would like to have a look how many snps position is there until my data will be a plateau curve. . Could you please help me out.</span></div><br><div><div style="font-size:12.8px"><br></div><div style="font-size:12.8px">Thanks Advance. </div><div style="font-size:12.8px"><br></div><div style="font-size:12.8px"><br></div><br><img width="0" height="0" class="mailtrack-img" src="https://mailtrack.io/trace/mail/84b961ebf28a4345d45bffe02263e9679f94ee3b.png?u=1066922"><br>-- <br><div class="gmail_signature"><div dir="ltr"><div><span style="background-color:rgb(11,83,148)"><span style="color:rgb(7,55,99)"><span style="font-family:arial,helvetica,sans-serif"></span></span></span><span style="color:rgb(11,83,148)"><i><span></span></i></span><span style="color:rgb(11,83,148)"></span><span></span><p style="margin-bottom:0in;font-weight:normal" align="LEFT"><span style="color:rgb(7,55,99)"><span face="Bitstream Charter, serif" data-mce-style="font-family: 'Bitstream Charter', serif;" style="font-family: 'Bitstream Charter', serif;"><span size="3" data-mce-style="font-size: medium;" style="font-size: medium;"><i><span style="font-weight:normal">Hiren
Ghosh, Doctoral Research Scholar <br>Biomedizinisches
Forschungszentrum Seltersberg<br>Institut für Medizinische
Mikrobiologie<br>Justus-Liebig-Universität<br>Schubertstr. 81<br>35392
Gießen , Germany</span></i></span></span></span></p><p style="margin-bottom:0in;font-weight:normal" align="LEFT"><span style="color:rgb(7,55,99)"><span face="Bitstream Charter, serif" data-mce-style="font-family: 'Bitstream Charter', serif;" style="font-family: 'Bitstream Charter', serif;"><span size="3" data-mce-style="font-size: medium;" style="font-size: medium;"><i>Mobile
No: 017672157634</i></span></span></span></p><span style="color:rgb(7,55,99)">
</span><p style="margin-bottom:0in" align="LEFT"><span style="color:rgb(7,55,99)"><a href="mailto:Email%3Ahiren.ghosh@med.uni-giessen.de" target="_blank"><span face="Bitstream Charter, serif" data-mce-style="font-family: 'Bitstream Charter', serif;" style="font-family: 'Bitstream Charter', serif;"><span size="3" data-mce-style="font-size: medium;" style="font-size: medium;"><i><span style="font-weight:normal">Email:hiren.ghosh@med.uni-giessen.de</span></i></span></span></a></span></p>
</div></div></div>
<br><br><br><div class="mt-signature"><img width="16" height="14" src="https://s3-eu-west-1.amazonaws.com/mailtrack-crx/icon-signature.png"> <span color="#999999" class="mt-signature-text" data-mce-style="color: #999999;" style="color: #999999;">Sent with <a href="https://mailtrack.io/install?source=signature&lang=en&referral=hiren.ghosh@gmail.com&idSignature=22" class="mt-install" target="_blank">Mailtrack</a></span></div></div></div>
<br>_______________________________________________<br>adegenet-forum mailing list<br>adegenet-forum@lists.r-forge.r-project.org<br>https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/adegenet-forum<br></div></div></body></html>