<html><body><div style="font-family: trebuchet ms,sans-serif; font-size: 12pt; color: #000000"><div>Hello Max,</div><div><br data-mce-bogus="1"></div><div>is there a question here? If you have problems with your code, it's best to provide a reproducible example. Feel free to use any of the datasets that comes shipped with adegenet or perhaps you could simulate your own data.</div><div><br data-mce-bogus="1"></div><div>Cheers,</div><div>Roman</div><div><br></div><div data-marker="__SIG_PRE__">----<br>In god we trust, all others bring data.</div><br><hr id="zwchr" data-marker="__DIVIDER__"><div data-marker="__HEADERS__"><b>From: </b>"Max Williams" <mw14533.2014@my.bristol.ac.uk><br><b>To: </b>adegenet-forum@lists.r-forge.r-project.org<br><b>Sent: </b>Wednesday, November 23, 2016 9:05:17 PM<br><b>Subject: </b>[adegenet-forum] PCoA<br></div><br><div data-marker="__QUOTED_TEXT__"><div dir="ltr"><div><div><div>Dear All<br><br></div>I have recently used PCoA in adegenet to produce the following graph, using the s.class function (shown in attachment). Once i defined my PCoA data as the variable "pca.kelp" i inputted this into adegenet:<br><br>s.class(pca.cows$li, fac=pop(microbov), col=funky(15))<br><br></div>s.class(pca.kelp$li, fac=pop(genind1), <br> +col=transp(funky(15),.6),<br></div> +axesel=FALSE, cstar=0, cpoint=3)<br><div><br><div>I am fairly new to R statistics and would appreciate your time.<br><br></div><div>Many thanks<br></div><div>Max<br></div></div></div>
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