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<div><font size="2">Hi there, <br>
<br>
the variables are alleles here, not only markers. To ensure that your datasets have the same alleles, use the function repool to merge the two datasets, run the DAPC on the chosen subset, and then use the rest as supplementary individuals.<br>
<br>
Makes sense?<br>
<br>
Cheers<br>
Thibaut<br>
<br>
<br>
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<div style="direction: ltr;" id="divRpF895253"><font face="Tahoma" size="2" color="#000000"><b>From:</b> adegenet-forum-bounces@lists.r-forge.r-project.org [adegenet-forum-bounces@lists.r-forge.r-project.org] on behalf of Emmanuel WICKER [emmanuel.wicker@cirad.fr]<br>
<b>Sent:</b> 24 February 2015 10:54<br>
<b>To:</b> adegenet-forum@lists.r-forge.r-project.org<br>
<b>Subject:</b> [adegenet-forum] Help : DAPC and Supplementary individuals<br>
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<div>Dear all,<br>
I first performed a DAPC on a worlwide dataset genotyped using 8 microsat loci. Then I tried to inject in this analysis supplementary individuals , genotyped with all same 8 loci. The error message says that "the number of variables does not match original
data". The loci are the same in both datasets, can anyone help me find what is going wrong ?<br>
Cheers<br>
Manu<br>
<div class="moz-signature">-- <br>
<b>Emmanuel WICKER</b>, PhD <br>
Phytopathologiste / Plant Pathologist <br>
<i>CIRAD, UMR Peuplements Végétaux et Bioagresseurs en Milieu Tropical (PVBMT)</i>
<br>
Pôle de Protection des Plantes <br>
7, chemin de l'IRAT <br>
F-97410 Saint Pierre <br>
La Réunion, France <br>
<a href="UrlBlockedError.aspx" target="_blank">wicker@cirad.fr </a><br>
<a href="http://umr-pvbmt.cirad.fr/" target="_blank">SITE WEB PVBMT </a><br>
<b>Tel</b> : +262 (0) 262 49 92 42 <br>
<b>Fax</b> : +262 (0) 262 49 92 93</div>
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