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<div><font size="2">Best to use existing clusters then. <br>
<br>
Check ?find.clusters:<br>
", n.iter=1e5, ..."<br>
<br>
and <br>
"<br>
n.iter: an ‘integer’ indicating the number of iterations to be used<br>
in each run of K-means algorithm. Corresponds to ‘iter.max’<br>
of ‘kmeans’ function.<br>
"<br>
<br>
Cheers<br>
Thibaut<br>
<br>
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<div style="direction: ltr;" id="divRpF19539"><font color="#000000" face="Tahoma" size="2"><b>From:</b> adegenet-forum-bounces@lists.r-forge.r-project.org [adegenet-forum-bounces@lists.r-forge.r-project.org] on behalf of Mark Coulson [coulsonmw@gmail.com]<br>
<b>Sent:</b> 01 December 2014 14:49<br>
<b>To:</b> adegenet-forum@lists.r-forge.r-project.org<br>
<b>Subject:</b> [adegenet-forum] error in DAPC<br>
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<div dir="ltr">Hi, I do have groups already defined (sites within rivers) and could therefore use those (or indeed the river-level). The clustering step didn't take too long (~ 30 min). Do you mean iter.max (or n.inter) for the number of steps in Kmeans? What
is the default for this, so I have an idea for what to increase to?
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<div>Cheers,</div>
<div>Mark</div>
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