<html><head></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; color: rgb(0, 0, 0); font-size: 14px; "><div><div><div style="font-family: Calibri, sans-serif; ">Hello,</div><div style="font-family: Calibri, sans-serif; "><br></div><div style="font-family: Calibri, sans-serif; ">I am trying to run adegenet on a large dataset (17 loci, but for ~12,000 individuals). </div><div style="font-family: Calibri, sans-serif; "><br></div><div style="font-family: Calibri, sans-serif; ">When I run the find.clusters argument it allows me to pick the number of pc but then gives the following message:</div><div style="font-family: Calibri, sans-serif; "><br></div><div style="font-family: Calibri, sans-serif; "><p style="margin: 0.0px 0.0px 0.0px 0.0px; font: 12.0px Helvetica">Warning messages:</p>
<p style="margin: 0.0px 0.0px 0.0px 0.0px; font: 12.0px Helvetica">1: Quick-TRANSfer stage steps exceeded maximum (= 616850) </p>
<p style="margin: 0.0px 0.0px 0.0px 0.0px; font: 12.0px Helvetica">2: Quick-TRANSfer stage steps exceeded maximum (= 616850) </p>
<p style="margin: 0.0px 0.0px 0.0px 0.0px; font: 12.0px Helvetica">3: Quick-TRANSfer stage steps exceeded maximum (= 616850) </p><p style="margin: 0.0px 0.0px 0.0px 0.0px; font: 12.0px Helvetica"><br></p><p style="margin: 0.0px 0.0px 0.0px 0.0px; font: 12.0px Helvetica">Are there limits to the dataset size?</p><p style="margin: 0.0px 0.0px 0.0px 0.0px; font: 12.0px Helvetica"><br></p><p style="margin: 0.0px 0.0px 0.0px 0.0px; font: 12.0px Helvetica">Mark</p></div><div><div><br></div></div></div></div></body></html>