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<body class='hmmessage'><div dir='ltr'>Hi,<div><br></div><div>I am trying to load genome information using the read.PLINK feature. The data uploads fine with no error messages, however when I examine the @other slot, I see that the SNP positions from the map file are not uploaded. I've checked that my .map file contains all the necessary columns and all the information is there.</div><div><br></div><div><span style="font-family: Cambria, serif; font-size: 12pt;"><font color="#ac193d">>chr2L<-read.PLINK ("2L.raw",
map.file="2L_hwe_cleaned.map", chunkSize=10000, parallel=FALSE)</font></span></div><div><span style="font-family: Cambria, serif; font-size: 12pt;"><font color="#ac193d"><br></font></span></div><div><div style="font-size: 12pt; font-family: Cambria, serif;"><font color="#ac193d">>chr2L$other$position</font></div><div style="font-size: 12pt; font-family: Cambria, serif;"><font color="#ac193d">NULL</font></div><div style="font-size: 12pt; font-family: Cambria, serif;"><br></div><div style="font-size: 12pt; font-family: Cambria, serif;"><br></div></div><div style="font-size: 12pt; font-family: Cambria, serif;"><br></div><div style="font-size: 12pt; font-family: Cambria, serif;">Any ideas?</div><div style="font-size: 12pt; font-family: Cambria, serif;"><br></div><div style="font-size: 12pt; font-family: Cambria, serif;"><br></div><div style="font-size: 12pt; font-family: Cambria, serif;">Thanks,</div><div style="font-size: 12pt; font-family: Cambria, serif;">Danica</div><div style="font-size: 12pt; font-family: Cambria, serif;"><br></div><p class="MsoPlainText"><span style="font-family:"Cambria","serif";mso-bidi-font-family:
"Courier New""><o:p></o:p></span></p> </div></body>
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