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Hi,<div><br></div><div>I have been using adegenet to run DAPC analyses and then plot out the results using the scatter function. For the same dataset and parameters, when running and re-running the DAPC/scatter I get 6-7 clusters that plot out over the DAPC space in an arch pattern, however sometimes they plot in the shape of a arch like a smile, and other times in the exact same pattern except in an arch like a frown. For publication purposes I would like all scatter plots to be arranged in the same way (I am comparing 3 different datasets) but I don't see a code in the scatter function to change how the clusters are plotted (ie. in the smile vs. frown pattern) after the fact. I don't want to change what PCs are being plotted, just how the clusters are arranged around the axes. Is there some code to fix this? What I have been doing is just re-running the DAPC from the beginning and then using the scatter function over and over until I get the arch pattern that I want. This is kinda a pain. </div><div><br></div><div>If I am not being clear what my issue is I can try to provide more information. Thanks for any help offered, I appreciate it!</div><div><br></div><div>Nikki</div><div><br><div><br><div></div></div></div> </div></body>
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