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<div style="direction: ltr;font-family: Tahoma;color: #000000;font-size: 10pt;">Damn, that's a lot of things messing up from the start.<br>
<br>
There is still a bit of FAQ #4 there, so:<br>
<pre>source("http://bioconductor.org/biocLite.R")<br>biocLite("graph")<span style="font-family: monospace;"><br>install.packages("adegenet", dep=TRUE)</span><br></pre>
<span style="color: rgb(0, 153, 0);"><br>
<span style="color: rgb(0, 0, 0);">And then try to load the package. As far as I know it works fine on Leopard. In 1.3-1 the dependency on graph will definitely be removed.</span><br style="color: rgb(0, 0, 0);">
<br style="color: rgb(0, 0, 0);">
<span style="color: rgb(0, 0, 0);">Cheers</span><br style="color: rgb(0, 0, 0);">
<br style="color: rgb(0, 0, 0);">
<span style="color: rgb(0, 0, 0);">Thibaut</span><br style="color: rgb(0, 0, 0);">
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<div style="direction: ltr;" id="divRpF71132"><font color="#000000" face="Tahoma" size="2"><b>From:</b> adegenet-forum-bounces@r-forge.wu-wien.ac.at [adegenet-forum-bounces@r-forge.wu-wien.ac.at] on behalf of Vinson Doyle [sonofvin@gmail.com]<br>
<b>Sent:</b> 06 July 2011 18:26<br>
<b>To:</b> adegenet-forum@r-forge.wu-wien.ac.at<br>
<b>Subject:</b> [adegenet-forum] problems loading new version of adegenet<br>
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<div>I was working with adegenet 1.2.8 today when I the function transp() could not be found. I thought it might have to do with the version of adegenet and the version of R, so I updated to R 2.13.0 and adegenet 1.3.0. Now it seems that adegenet will not
load and I am unable to run any scripts. I can install it, but if I go to package manager and try to load it (or from the console) the following message is displayed:<br>
<br>
Loading required package: MASS<br>
Error in dyn.load(file, DLLpath = DLLpath, ...) : <br>
unable to load shared object '/Library/Frameworks/R.framework/Versions/2.13/Resources/library/adegenet/libs/i386/adegenet.so':<br>
dlopen(/Library/Frameworks/R.framework/Versions/2.13/Resources/library/adegenet/libs/i386/adegenet.so, 6): Library not loaded: /Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libR.dylib<br>
Referenced from: /Library/Frameworks/R.framework/Versions/2.13/Resources/library/adegenet/libs/i386/adegenet.so<br>
Reason: image not found<br>
Error in library(adegenet) : .First.lib failed for 'adegenet'<br>
Error in as.environment(pos) : <br>
no item called "newtable" on the search list<br>
In addition: Warning message:<br>
In objects(newtable, all.names = TRUE) :<br>
‘newtable’ converted to character string<br>
starting httpd help server ... done<br>
<br>
I am working on Mac OS X<br>
<br>
Thanks,<br>
V<br>
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