[adegenet-forum] question about warning message

Ella Bowles ebowles at ucalgary.ca
Tue Sep 22 21:28:48 CEST 2015


After I converted my data into a genlight object, I got the warning message
Warning message:
In matrix(txt, ncol = 4, byrow = TRUE) :
  data length [16397] is not a sub-multiple or multiple of the number of
rows [4100]

How do I know if this is a problem?

I have just over 4000 SNPs spread over 186 individuals. My data import line

data=read.PLINK(file='plink.raw', map.file='batch_1.plink.map', quiet =
FALSE, chunkSize = 186, parallel = FALSE)

With thanks,

Ella Bowles
PhD Candidate
Biological Sciences
University of Calgary

e-mail: ebowles at ucalgary.ca, bowlese at gmail.com
website: http://ellabowlesphd.wordpress.com/
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