[adegenet-forum] F statistics

Carlo Pecoraro carlo.pecoraro2 at unibo.it
Thu Sep 3 15:32:43 CEST 2015


Dear adegenet users,

I would like to test using the G-statistic if my Fst values are significant.

Gtest <- gstat.randtest(x,nsim=99) ### x is my genind object (4.7 MB) and I am using 99 simulations for the randtest
Gtest

The result obtained is very weird.44

sim: num [1:99] 00000000

obs: num 0

pvalue: num 1


Do you know which is the mistake? According to the fact that I have 1400 loci; Do I have increase the number nsim?


Thanks a lot in advance

Cheers

Carlo
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