[adegenet-forum] problems loading new version of adegenet

Vinson Doyle sonofvin at gmail.com
Wed Jul 6 19:26:31 CEST 2011


I was working with adegenet 1.2.8 today when I the function transp() could
not be found.  I thought it might have to do with the version of adegenet
and the version of R, so I updated to R 2.13.0 and adegenet 1.3.0.  Now it
seems that adegenet will not load and I am unable to run any scripts.  I can
install it, but if I go to package manager and try to load it (or from the
console) the following message is displayed:

Loading required package: MASS
Error in dyn.load(file, DLLpath = DLLpath, ...) :
  unable to load shared object
'/Library/Frameworks/R.framework/Versions/2.13/Resources/library/adegenet/libs/i386/adegenet.so':

dlopen(/Library/Frameworks/R.framework/Versions/2.13/Resources/library/adegenet/libs/i386/adegenet.so,
6): Library not loaded:
/Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libR.dylib
  Referenced from:
/Library/Frameworks/R.framework/Versions/2.13/Resources/library/adegenet/libs/i386/adegenet.so
  Reason: image not found
Error in library(adegenet) : .First.lib failed for 'adegenet'
Error in as.environment(pos) :
  no item called "newtable" on the search list
In addition: Warning message:
In objects(newtable, all.names = TRUE) :
  ‘newtable’ converted to character string
starting httpd help server ... done

I am working on Mac OS X

Thanks,
V
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