[adegenet-forum] proportion of shared alleles

[Thibaut Jombart]

Grant Gillis wrote:
> List and Thibaut,
>
> I posted this question on the R-sig-phylo list and Thibaut suggested 
> that this is a more appropriate list.  Great looking package by the 
> way.   I am looking for a way to calculate the proportions of shared 
> alleles between individuals.  I have been looking through the 
> documentation but am having a hard time getting started (a result of 
> my lack of familiarity with R).  Any ideas or nudges in the right 
> direction are appreciated.
>
> Grant
> ------------------------------------------------------------------------
>
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Hi again,

the computation of proportion of shared alleles is now implemented, with 
core computations in C (function propShared). NAs are no longer a 
problem. I just commited the change, so it should be available from the 
R-Forge's snapshot tomorrow.

Cheers,

Thibaut.

-- 
######################################
Thibaut JOMBART
CNRS UMR 5558 - Laboratoire de Biométrie et Biologie Evolutive
Universite Lyon 1
43 bd du 11 novembre 1918
69622 Villeurbanne Cedex
Tél. : 04.72.43.29.35
Fax : 04.72.43.13.88
jombart at biomserv.univ-lyon1.fr
http://biomserv.univ-lyon1.fr/%7Ejombart/
http://adegenet.r-forge.r-project.org/