From noreply at r-forge.r-project.org  Wed Sep 30 10:43:26 2015
From: noreply at r-forge.r-project.org (noreply at r-forge.r-project.org)
Date: Wed, 30 Sep 2015 10:43:26 +0200 (CEST)
Subject: [adegenet-commits] r1220 - in www: . images
Message-ID: <20150930084326.D97CB180AE8@r-forge.r-project.org>

Author: jombart
Date: 2015-09-30 10:43:26 +0200 (Wed, 30 Sep 2015)
New Revision: 1220

Added:
   www/images/github.png
Modified:
   www/marge.html
Log:
linking to github now

Added: www/images/github.png
===================================================================
(Binary files differ)


Property changes on: www/images/github.png
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream

Modified: www/marge.html
===================================================================
--- www/marge.html	2015-08-12 11:45:11 UTC (rev 1219)
+++ www/marge.html	2015-09-30 08:43:26 UTC (rev 1220)
@@ -65,13 +65,12 @@
           </span></big><a
           href="http://sourceforge.net/projects/adegenet/"><big><span
               style="text-decoration: underline;"></span></big></a><a
-          href="https://sourceforge.net/projects/adegenet/?source=directory"><big></big></a><big><a
-href="https://sourceforge.net/projects/adegenet/?source=directory"
-            target="_top"><img alt="sourceforge"
-              src="images/sourceforge.png" style="border: 0px solid;
-              width: 110px; height: 34px;" border="0" height="36"
-              width="194"></a></big><big><span style="text-decoration:
-            underline;"><br>
+          href="https://github.com/thibautjombart/adegenet/"><big><a
+              href="https://github.com/thibautjombart/adegenet/"
+              target="_top"><img alt="github" src="images/github.png"
+                style="border: 0px solid; width: 110px; height: 34px;"
+                height="230" border="0" width="580"></a></big></a><big><span
+            style="text-decoration: underline;"><br>
           </span></big><big><span style="text-decoration: underline;"><br>
           </span></big></div>
     </div>


From noreply at r-forge.r-project.org  Wed Sep 30 11:45:13 2015
From: noreply at r-forge.r-project.org (noreply at r-forge.r-project.org)
Date: Wed, 30 Sep 2015 11:45:13 +0200 (CEST)
Subject: [adegenet-commits] r1221 - in www: . files files/Barcelona2015
Message-ID: <20150930094514.06008183EDF@r-forge.r-project.org>

Author: jombart
Date: 2015-09-30 11:45:13 +0200 (Wed, 30 Sep 2015)
New Revision: 1221

Added:
   www/files/Barcelona2015/
   www/files/Barcelona2015/Enonsensicus1.RData
   www/files/Barcelona2015/Enonsensicus2.RData
   www/files/Barcelona2015/lecture-MVA.1.0.pdf
   www/files/Barcelona2015/lecture-MVAgroups.1.0.pdf
   www/files/Barcelona2015/lecture-MVAspatial.1.0.pdf
   www/files/Barcelona2015/practical-MVAgroups.1.0-allCmds.pdf
   www/files/Barcelona2015/practical-MVAgroups.1.0.pdf
   www/files/Barcelona2015/practical-MVAintro-allCmd.1.0.pdf
   www/files/Barcelona2015/practical-MVAintro.1.0.pdf
   www/files/Barcelona2015/practical-MVAspatial.1.0.pdf
   www/files/Barcelona2015/unknown1.RData
   www/files/Barcelona2015/unknown2.RData
Modified:
   www/documentation.html
Log:
adding material for Barcelona course

Modified: www/documentation.html
===================================================================
--- www/documentation.html	2015-09-30 08:43:26 UTC (rev 1220)
+++ www/documentation.html	2015-09-30 09:45:13 UTC (rev 1221)
@@ -87,6 +87,7 @@
 
 
 
+
         engine</a><span style="font-family: Helvetica,Arial,sans-serif;">.
       </span><br style="font-family: Helvetica,Arial,sans-serif;">
       <br style="font-family: Helvetica,Arial,sans-serif;">
@@ -120,6 +121,7 @@
 
 
 
+
       </font><br>
       <span style="font-weight: bold; color: rgb(0, 102, 0);
         font-family: Helvetica,Arial,sans-serif;"><br>
@@ -225,6 +227,7 @@
 
 
 
+
             Epidemiology</span> / <i>Public Health</i>: <span
             style="font-weight: bold;">Introduction to phylogenetics</span>
           (last updated on the 15/13/2013)</li>
@@ -282,6 +285,7 @@
 
 
 
+
             Epidemiology</span> / <i>Public Health</i>: <span
             style="font-weight: bold;">Introduction to multivariate
             analysis / bacterial GWAS</span> (last updated on the
@@ -335,6 +339,7 @@
 
 
 
+
           </b><b><i>outbreaker</i></b></li>
         <ul>
           <li><a href="files/GenEpiTalk.1.0.pdf">talk</a></li>
@@ -374,6 +379,7 @@
 
 
 
+
             analysis using <span style="font-style: italic;">ape,
               adegenet,</span> </span><b>and </b><b><i>outbreaker</i></b></li>
         <ul>
@@ -452,6 +458,7 @@
 
 
 
+
               all commands</a>]</li>
           <li>An introduction to Genome Wise Association Studies (GWAS)
             [<a
@@ -467,8 +474,7 @@
       </ul>
       <ul style="font-family: Helvetica,Arial,sans-serif;">
         <li>Workshop "<span style="font-weight: bold;">Genetic data
-            analysis with R</span>" - Glasgow (August 2015) <img
-            alt="new" src="images/new.png" height="37" width="80"></li>
+            analysis with R</span>" - Glasgow (August 2015)&nbsp;</li>
         <ul>
           <li>Introduction to phylogenetics [<a
               href="files/Glasgow2015/lecture-phylo.1.0.pdf">lecture</a>,
@@ -481,6 +487,7 @@
               href="files/Glasgow2015/practical-MVAintro-allCmd.1.0.pdf">practical
 
 
+
               with all commands</a>] </li>
           <li>Multivariate analysis of genetic data: exploring group
             diversity [<a
@@ -488,6 +495,7 @@
             <a href="files/Glasgow2015/practical-MVAgroups.1.0.pdf">practical</a>,
             <a
               href="files/Glasgow2015/practical-MVAgroups.1.0-allCmds.pdf">practical
+
               with all commands</a>]<br>
           </li>
           <li>An introduction to Genome Wise Association Studies (GWAS)
@@ -501,6 +509,28 @@
               href="files/Glasgow2015/lecture-MVAspatial.1.0.pdf">lecture</a>,
             <a href="files/Glasgow2015/practical-MVAspatial.1.0.pdf">practical</a>]</li>
         </ul>
+        <li>Workshop "<span style="font-weight: bold;">Exploratory
+            methods for population genetics using R</span>" - Barcelona
+          (October 2015) <img alt="new" src="images/new.png"
+            height="37" width="80"></li>
+        <ul>
+          <li>Multivariate analysis of genetic data: an introduction [<a
+href="file:///home/thibaut/dev/adegenet/www/files/Barcelona2015/lecture-MVA.1.0.pdf">lecture</a>,
+            <a
+href="file:///home/thibaut/dev/adegenet/www/files/Barcelona2015/practical-MVAintro.1.0.pdf">practical</a>]&nbsp;
+          </li>
+          <li>Multivariate analysis of genetic data: exploring group
+            diversity [<a
+              href="files/Barcelona2015/lecture-MVAgroups.1.0.pdf">lecture</a>,
+            <a href="files/Barcelona2015/practical-MVAgroups.1.0.pdf">practical</a>]<br>
+          </li>
+          <li>Multivariate analysis of genetic data: uncovering spatial
+            structures [<a
+              href="files/Barcelona2015/lecture-MVAspatial.1.0.pdf">lecture</a>,
+            <a href="files/Barcelona2015/practical-MVAspatial.1.0.pdf">practical</a>]</li>
+        </ul>
+        <ul>
+        </ul>
       </ul>
       <br style="font-family: Helvetica,Arial,sans-serif;">
       <span style="font-weight: bold; color: rgb(0, 102, 0);

Added: www/files/Barcelona2015/Enonsensicus1.RData
===================================================================
(Binary files differ)


Property changes on: www/files/Barcelona2015/Enonsensicus1.RData
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream

Added: www/files/Barcelona2015/Enonsensicus2.RData
===================================================================
(Binary files differ)


Property changes on: www/files/Barcelona2015/Enonsensicus2.RData
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream

Added: www/files/Barcelona2015/lecture-MVA.1.0.pdf
===================================================================
(Binary files differ)


Property changes on: www/files/Barcelona2015/lecture-MVA.1.0.pdf
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream

Added: www/files/Barcelona2015/lecture-MVAgroups.1.0.pdf
===================================================================
(Binary files differ)


Property changes on: www/files/Barcelona2015/lecture-MVAgroups.1.0.pdf
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream

Added: www/files/Barcelona2015/lecture-MVAspatial.1.0.pdf
===================================================================
(Binary files differ)


Property changes on: www/files/Barcelona2015/lecture-MVAspatial.1.0.pdf
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream

Added: www/files/Barcelona2015/practical-MVAgroups.1.0-allCmds.pdf
===================================================================
(Binary files differ)


Property changes on: www/files/Barcelona2015/practical-MVAgroups.1.0-allCmds.pdf
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream

Added: www/files/Barcelona2015/practical-MVAgroups.1.0.pdf
===================================================================
(Binary files differ)


Property changes on: www/files/Barcelona2015/practical-MVAgroups.1.0.pdf
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream

Added: www/files/Barcelona2015/practical-MVAintro-allCmd.1.0.pdf
===================================================================
(Binary files differ)


Property changes on: www/files/Barcelona2015/practical-MVAintro-allCmd.1.0.pdf
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream

Added: www/files/Barcelona2015/practical-MVAintro.1.0.pdf
===================================================================
(Binary files differ)


Property changes on: www/files/Barcelona2015/practical-MVAintro.1.0.pdf
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream

Added: www/files/Barcelona2015/practical-MVAspatial.1.0.pdf
===================================================================
(Binary files differ)


Property changes on: www/files/Barcelona2015/practical-MVAspatial.1.0.pdf
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream

Added: www/files/Barcelona2015/unknown1.RData
===================================================================
(Binary files differ)


Property changes on: www/files/Barcelona2015/unknown1.RData
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream

Added: www/files/Barcelona2015/unknown2.RData
===================================================================
(Binary files differ)


Property changes on: www/files/Barcelona2015/unknown2.RData
___________________________________________________________________
Added: svn:mime-type
   + application/octet-stream