links

The -adegenet -forum
-For all discussions/questions related to adegenet.
-- one address: adegenet-forum AT lists DOT r-forge DOT r-project -DOT org
-- to subscribe to this mailing list, go here
-- please read the guidelines -before sending a post
-- use the search engine to look for information in the -archives
-- alternatively, you can browse + + +

+ Note: I no longer reply to personal emails asking questions that + should be asked on the adegenet forum. The only exception is when + confidential data are involved, or for bug reports. All other + questions should go on the adegenet forum. Excitingly, all you + need to know about this forum is just below.
+

+
+
+

The + adegenet + forum
+ For all discussions/questions related to adegenet.
+ - one address: adegenet-forum AT lists DOT r-forge DOT r-project + DOT org
+ - to subscribe to this mailing list, go here
+ - please read the guidelines + before sending a post
+ - use the search engine to look for information in + the + archives
+ - alternatively, you can browse + the + archives of adegenet forum
+ - the most frequent questions and their answers are listed at the + bottom of this page.
+
+
+

+ For more general questions about the -archives of adegenet forum
-- the most frequent questions and their answers are listed at the -bottom of this page.
-
-
-

-For more general questions about -the analysis of genetic markers in R, -use the R-sig-genetics -mailing list.
-
-
-

-Want -to track the evolution of the package from the inside ?
-Subscribe to the commit mailing-list here
-
-
-

-Contributions, direct contact with the author: t.jombart AT imperial -DOT ac DOT uk
-
-
-Please, do use -the adegenet forum to -ask questions concerning the -package. Browsable archives of this mailing list allow other -users to -benefit from previous answers.
-
-Frequently -Asked Questions (and their answers):
-
-# 1: How do I know which R version -/ adegenet version I'm using?
-For R version, type:
-R.version
-
-For adegenet version, type:
-packageDescription("adegenet", -field="Version")
-
-
-# 2: Loading adegenet fails on -windows Vista; what's going on?
-This is likely caused by a wrong installation of the package, or not -installing the dependencies.
-Start R in 'Administrator' mode (right click on R's icon -> "start -as administrator"), then type:
-install.packages("adegenet", -dep=TRUE)
-
-
-# 3: Help pages are not found on -windows...
-This is likely because your R installation did not include help pages -in html. You need to specify you want to use help in text mode. This is -achieved by typing:
-options("help_type"="text")
-
-
-# 4: Loading adegenet fails -with this error (R >= 2.13.0):
-Error in as.environment(pos) : no -item called "newtable" on the search list
-This is because the package 'graph', -on -which -adegenet depends, -has been removed from CRAN. You need to install graph from bioconductor -first, and then install adegenet:
-

source("http://bioconductor.org/biocLite.R")
biocLite("graph")
install.packages("adegenet", dep=TRUE)

-
-
-
-
-
-
-

- +use + the R-sig-genetics + mailing list.
+
+
+

+ Want + to track the evolution of the package from the inside ?
+ Subscribe to the commit mailing-list here
+
+
+

+ Contributions, direct contact with the author: t.jombart AT + imperial + DOT ac DOT uk
+
+
+ Please, + do use + the adegenet forum to + ask questions concerning the + package. Browsable archives of this mailing list allow + other + users to + benefit from previous answers.
+
+ Frequently + Asked Questions (and their answers):
+
+ # 1: How do I know which R + version + / adegenet version I'm using?
+ For R version, type:
+ R.version
+
+ For adegenet version, type:
+ packageDescription("adegenet", + field="Version")
+
+
+ # 2: Loading adegenet fails + on + windows Vista; what's going on?
+ This is likely caused by a wrong installation of the package, or + not + installing the dependencies.
+ Start R in 'Administrator' mode (right click on R's icon -> + "start + as administrator"), then type:
+ install.packages("adegenet", + dep=TRUE)
+
+
+ # 3: Help pages are not found + on + windows...
+ This is likely because your R installation did not include help + pages + in html. You need to specify you want to use help in text mode. + This is + achieved by typing:
+ options("help_type"="text")
+
+
+ # 4: Loading adegenet + fails + with this error (R >= 2.13.0):
+ Error in + as.environment(pos) : no + item called "newtable" on the search list
+ This is because the package 'graph', + on + which + adegenet depends, + has been removed from CRAN. You need to install graph from + bioconductor + first, and then install adegenet:
+

source("http://bioconductor.org/biocLite.R")
biocLite("graph")
install.packages("adegenet", dep=TRUE)

+
+
+
+
+
+
+