[adegenet-commits] r956 - in pkg: . R inst/doc man

[noreply at r-forge.r-project.org]

Author: jombart
Date: 2011-09-06 12:06:07 +0200 (Tue, 06 Sep 2011)
New Revision: 956

Modified:
   pkg/ChangeLog
   pkg/DESCRIPTION
   pkg/R/zzz.R
   pkg/inst/doc/adegenet-genomics.Rnw
   pkg/man/adegenet.package.Rd
Log:
Devel is now 1.3-2


Modified: pkg/ChangeLog
===================================================================
--- pkg/ChangeLog	2011-09-05 09:31:53 UTC (rev 955)
+++ pkg/ChangeLog	2011-09-06 10:06:07 UTC (rev 956)
@@ -1,7 +1,17 @@
-			CHANGES IN ADEGENET VERSION 1.3-1
+			CHANGES IN ADEGENET VERSION 1.3-2
 
+BUG FIXES
 
+	o
 
+NEW FEATURES
+
+	o
+
+
+
+			CHANGES IN ADEGENET VERSION 1.3-1
+
 BUG FIXES
 
 	o removed all dependency with graph package, which was still
@@ -22,8 +32,6 @@
 
 			CHANGES IN ADEGENET VERSION 1.3-0
 
-
-
 BUG FIXES
 
 	o fixed broken dependencies with hierfstat and graph packages
@@ -68,8 +76,6 @@
 
 			CHANGES IN ADEGENET VERSION 1.2-8
 
-
-
 BUG FIXES
 
 	o fixed a major issue in the conversion of genind objects to

Modified: pkg/DESCRIPTION
===================================================================
--- pkg/DESCRIPTION	2011-09-05 09:31:53 UTC (rev 955)
+++ pkg/DESCRIPTION	2011-09-06 10:06:07 UTC (rev 956)
@@ -1,5 +1,5 @@
 Package: adegenet
-Version: 1.3-1
+Version: 1.3-2
 Date: 2011/09/01
 Title: adegenet: an R package for the exploratory analysis of genetic and genomic data.
 Author:  Thibaut Jombart <t.jombart at imperial.ac.uk>

Modified: pkg/R/zzz.R
===================================================================
--- pkg/R/zzz.R	2011-09-05 09:31:53 UTC (rev 955)
+++ pkg/R/zzz.R	2011-09-06 10:06:07 UTC (rev 956)
@@ -2,7 +2,7 @@
 #.initAdegenetClasses()
 #.initAdegenetUtils()
     library.dynam("adegenet", pkg, lib)
-    startup.txt <- "   ==========================\n    adegenet 1.3-1 is loaded\n   ==========================\n\n - to start, type '?adegenet'\n - to browse adegenet website, type 'adegenetWeb()'\n - to post questions/comments: adegenet-forum at lists.r-forge.r-project.org\n\n"
+    startup.txt <- "   ==========================\n    adegenet 1.3-2 is loaded\n   ==========================\n\n - to start, type '?adegenet'\n - to browse adegenet website, type 'adegenetWeb()'\n - to post questions/comments: adegenet-forum at lists.r-forge.r-project.org\n\n"
 
     packageStartupMessage(startup.txt)
 }

Modified: pkg/inst/doc/adegenet-genomics.Rnw
===================================================================
--- pkg/inst/doc/adegenet-genomics.Rnw	2011-09-05 09:31:53 UTC (rev 955)
+++ pkg/inst/doc/adegenet-genomics.Rnw	2011-09-06 10:06:07 UTC (rev 956)
@@ -65,7 +65,7 @@
 making former tools developed for classical genetic markers such as microsatellite impracticable using
 standard computers.
 Adegenet has developed new object classes dedicated to handling genome-wide polymorphism (SNPs) with
-minimum rapid access memory (RAM) requirements.
+minimum random access memory (RAM) requirements.
 \\
 
 Two new formal classes have been implemented: \texttt{SNPbin}, used to store genome-wide SNPs for

Modified: pkg/man/adegenet.package.Rd
===================================================================
--- pkg/man/adegenet.package.Rd	2011-09-05 09:31:53 UTC (rev 955)
+++ pkg/man/adegenet.package.Rd	2011-09-06 10:06:07 UTC (rev 956)
@@ -187,7 +187,7 @@
   \tabular{ll}{
     Package: \tab adegenet\cr
     Type: \tab Package\cr
-    Version: \tab 1.3-1\cr
+    Version: \tab 1.3-2\cr
     Date: \tab 2011-09-01 \cr
     License: \tab GPL (>=2)
   }