[adegenet-commits] r638 - in pkg: . man

[noreply at r-forge.r-project.org]

Author: jombart
Date: 2010-05-18 16:15:30 +0200 (Tue, 18 May 2010)
New Revision: 638

Modified:
   pkg/DESCRIPTION
   pkg/man/haploGen.Rd
Log:
Install is fine, examples are fine, definition of summary as a generic is fine, method for genind/genpop are found and well defined...
but the check would not be passed.
Need to find an exorcist soon.


Modified: pkg/DESCRIPTION
===================================================================
--- pkg/DESCRIPTION	2010-05-18 13:49:05 UTC (rev 637)
+++ pkg/DESCRIPTION	2010-05-18 14:15:30 UTC (rev 638)
@@ -10,6 +10,5 @@
 Suggests: ade4, genetics, hierfstat, spdep, tripack, ape, pegas, graph, RBGL
 Depends: methods, MASS
 Description: Classes and functions for genetic data analysis within the multivariate framework.
-Collate: auxil.R  classes.R basicMethods.R chooseCN.R colorplot.R coords.monmonier.R dapc.R dist.genpop.R export.R find.clust.R fstat.R genind2genpop.R gstat.randtest.R handling.R haploGen.R haploPop.R Hs.R HWE.R hybridize.R import.R loadingplot.R makefreq.R monmonier.R old2new.R PCtest.R propShared.R propTyped.R scale.R seqTrack.R sequences.R setAs.R spca.R spca.rtests.R zzz.R 
 License: GPL (>=2)
 LazyLoad: yes
\ No newline at end of file

Modified: pkg/man/haploGen.Rd
===================================================================
--- pkg/man/haploGen.Rd	2010-05-18 13:49:05 UTC (rev 637)
+++ pkg/man/haploGen.Rd	2010-05-18 14:15:30 UTC (rev 638)
@@ -40,13 +40,13 @@
               geo.sim=TRUE, grid.size=5, lambda.xy=0.5,
               mat.connect=NULL, ini.n=1, ini.xy=NULL)
 
-print.haploGen(x, \ldots)
+\method{print}{haploGen}(x, \ldots)
 
 \method{[}{haploGen}(x, i, j, drop=FALSE)
 
 \method{labels}{haploGen}(object, \ldots)
 
-as.POSIXct.haploGen(x, tz="", origin=as.POSIXct("2000/01/01"), \ldots)
+\method{as.POSIXct}{haploGen}(x, tz="", origin=as.POSIXct("2000/01/01"), \ldots)
 
 \method{seqTrack}{haploGen}(x, best=c("min","max"), prox.mat=NULL, \ldots)